RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ABCB5Q2M3G0 1257 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 FAM83BQ5T0W9 1011 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 CCDC12Q8WUD4 166 aaPredicted RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 KIAA1024Q9UPX6 916 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 CTDP1Q9Y5B0 961 aaPredicted RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 LAMB4A4D0S4 1761 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 POTEB3A0JP26 581 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 POTECB2RU33 542 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 F5H6K3 240 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 RPN1P04843 607 aaKnown RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 POTEIP0CG38 1075 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 KLRC3Q07444 240 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 STK4Q13043 487 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 QRICH1Q2TAL8 776 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 POTEBQ6S5H4 581 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 POTEGQ6S5H5 508 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 POTEEQ6S8J3 1075 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 NEK8Q86SG6 692 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 CSGALNACT2Q8N6G5 542 aa10.23□□□□□ -0.77
CKAP2-201ENST00000258607 BAG1Q99933 345 aaPredicted RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 OSBPL5Q9H0X9 879 aaPredicted RBP10.23□□□□□ -0.77
CKAP2-201ENST00000258607 MACROD2A1Z1Q3 448 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 ORC4O43929 436 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 TTLL1O95922 423 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 SLFN14P0C7P3 912 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 PDIA4P13667 645 aaKnown RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 PLCG2P16885 1265 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 NSMFQ6X4W1 530 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 KCNK18Q7Z418 384 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 CCDC148Q8NFR7 591 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 SMCR8Q8TEV9 937 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 MAGEC2Q9UBF1 373 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 MYH3P11055 1940 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 CICQ96RK0 1608 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 ABCA3Q99758 1704 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 MYO1BO43795 1136 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 OR52Z1P0C646 297 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 CCZ1BP86790 482 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 CCZ1P86791 482 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 CDC37Q16543 378 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 FILIP1LQ4L180 1135 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 DGKHQ86XP1 1220 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 SP8Q8IXZ3 490 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 LRRC15Q8TF66 581 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 TBC1D22AQ8WUA7 517 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 INTS13Q9NVM9 706 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 RGL1Q9NZL6 768 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 HPSEQ9Y251 543 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 MYCLP12524 364 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 SHMT1P34896 483 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 RASSF7Q02833 373 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 E4F1Q66K89 784 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 CALML4Q96GE6 196 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 ZNF668Q96K58 619 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-201ENST00000258607 CARD6Q9BX69 1037 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 JMJD4Q9H9V9 463 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 BARHL2Q9NY43 387 aa10.22□□□□□ -0.77
CKAP2-201ENST00000258607 NHSL1Q5SYE7 1610 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.21□□□□□ -0.77
CKAP2-201ENST00000258607 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.77
CKAP2-201ENST00000258607 KRT9P35527 623 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 RRP1BQ14684 758 aaKnown RBP10.21□□□□□ -0.77
CKAP2-201ENST00000258607 GRM4Q14833 912 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 PLCH1Q4KWH8 1693 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 ATL3Q6DD88 541 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 EEPD1Q7L9B9 569 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 TPH2Q8IWU9 490 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 PDCL2Q8N4E4 241 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 NEDD1Q8NHV4 660 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 PLEKHG2Q9H7P9 1386 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 DNAJC18Q9H819 358 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 ZNF408Q9H9D4 720 aa10.21□□□□□ -0.77
CKAP2-201ENST00000258607 TMEM150BA6NC51 233 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 YDJCA8MPS7 323 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 RNF225M0QZC1 329 aaPredicted RBP10.21□□□□□ -0.78
CKAP2-201ENST00000258607 GNA11P29992 359 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 FXR1P51114 621 aaKnown RBP eCLIP10.21□□□□□ -0.78
CKAP2-201ENST00000258607 PAK1Q13153 545 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 MORC3Q14149 939 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 SLC15A2Q16348 729 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 ARHGAP29Q52LW3 1261 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 C16orf86Q6ZW13 317 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 FAM84AQ96KN4 292 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 DDX25Q9UHL0 483 aaKnown RBP10.21□□□□□ -0.78
CKAP2-201ENST00000258607 ANAPC4Q9UJX5 808 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 ADAMTS7Q9UKP4 1686 aa10.21□□□□□ -0.78
CKAP2-201ENST00000258607 SPDYE3A6NKU9 549 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 ALAS1P13196 640 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 GNAQP50148 359 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 CTTNQ14247 550 aaKnown RBP10.2□□□□□ -0.78
CKAP2-201ENST00000258607 TDRD12Q587J7 1177 aaKnown RBP10.2□□□□□ -0.78
CKAP2-201ENST00000258607 HERC4Q5GLZ8 1057 aaPredicted RBP10.2□□□□□ -0.78
CKAP2-201ENST00000258607 DCAF17Q5H9S7 520 aaPredicted RBP10.2□□□□□ -0.78
CKAP2-201ENST00000258607 KIF18AQ8NI77 898 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 PPP1R13BQ96KQ4 1090 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 CHP1Q99653 195 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms