RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 GJA10Q969M2 543 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 USP26Q9BXU7 913 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 PI4KBQ9UBF8 816 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 HNRNPDLO14979 420 aaKnown RBP18.63■□□□□ 0.57
SORT1-201ENST00000256637 PDE8BO95263 885 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
SORT1-201ENST00000256637 RILPL1Q5EBL4 403 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 FMNL3Q8IVF7 1028 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 IGSF22Q8N9C0 903 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 NEO1Q92859 1461 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 PTH1RQ03431 593 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 TESK2Q96S53 571 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 HESX1Q9UBX0 185 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 SERTAD1Q9UHV2 236 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 RNF207Q6ZRF8 634 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 TEX2Q8IWB9 1127 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 GDAP1Q8TB36 358 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 SWAP70Q9UH65 585 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 ASIC3Q9UHC3 531 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 RABGAP1Q9Y3P9 1069 aa18.63■□□□□ 0.57
SORT1-201ENST00000256637 SFI1A8K8P3 1242 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 ANO4Q32M45 955 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 DDX12PQ92771 950 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 SEC24BO95487 1268 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 ZNF365Q70YC5 407 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 RRAGAQ7L523 313 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 FAM149B1Q96BN6 582 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 ATICP31939 592 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 MICALL2Q8IY33 904 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 FGAP02671 866 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 METTL14Q9HCE5 456 aaKnown RBP18.62■□□□□ 0.57
SORT1-201ENST00000256637 SMYD2Q9NRG4 433 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 HACL1Q9UJ83 578 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 KCNH4Q9UQ05 1017 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 GOLGA8IPA6NC78 632 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 GOLGA8JA6NMD2 632 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 CALCOCO2Q13137 446 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 SPECC1LQ69YQ0 1117 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 RIPOR2Q9Y4F9 1068 aa18.62■□□□□ 0.57
SORT1-201ENST00000256637 TNPO2O14787 897 aaKnown RBP18.61■□□□□ 0.57
SORT1-201ENST00000256637 SLC12A2P55011 1212 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 SCN4BQ8IWT1 228 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 CLIC6Q96NY7 704 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 SLC12A1Q13621 1099 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 ABCB11O95342 1321 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 GOLGA8CPA6NN73 597 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 AKR1B15C9JRZ8 316 aaPredicted RBP18.61■□□□□ 0.57
SORT1-201ENST00000256637 GOLGA8FQ08AF8 430 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 GOLGA8DPQ0D2H9 430 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 UBL4BQ8N7F7 174 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 RABEP2Q9H5N1 569 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 SSTR3P32745 418 aaPredicted RBP18.61■□□□□ 0.57
SORT1-201ENST00000256637 GTF2F1P35269 517 aaKnown RBP eCLIP18.61■□□□□ 0.571e-8■■□□□ 12.5
SORT1-201ENST00000256637 PLEKHG1Q9ULL1 1385 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 PLXNC1O60486 1568 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 CACNB2Q08289 660 aaPredicted RBP18.61■□□□□ 0.57
SORT1-201ENST00000256637 ARHGEF25Q86VW2 580 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 ATRIPQ8WXE1 791 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 CYP2D6P10635 497 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 CTTNQ14247 550 aaKnown RBP18.61■□□□□ 0.57
SORT1-201ENST00000256637 POSTNQ15063 836 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 SNRNP48Q6IEG0 339 aaKnown RBP18.61■□□□□ 0.57
SORT1-201ENST00000256637 BANK1Q8NDB2 785 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 KDM3AQ9Y4C1 1321 aa18.61■□□□□ 0.57
SORT1-201ENST00000256637 POLD4Q9HCU8 107 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 A0A087WWV3 80 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 TSGA10Q9BZW7 698 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 NUCKS1Q9H1E3 243 aaKnown RBP18.6■□□□□ 0.57
SORT1-201ENST00000256637 C1orf112Q9NSG2 853 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 ATG3Q9NT62 314 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 ANAPC4Q9UJX5 808 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 DDIT3P35638 169 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 LRRC41Q15345 812 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 TWF2Q6IBS0 349 aaKnown RBP18.6■□□□□ 0.57
SORT1-201ENST00000256637 CYP2B6P20813 491 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 SPP2Q13103 211 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 ODR4Q5SWX8 454 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 NEK8Q86SG6 692 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 DAAM2Q86T65 1068 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 PGBD3Q8N328 593 aa18.6■□□□□ 0.57
SORT1-201ENST00000256637 CPSF3Q9UKF6 684 aaKnown RBP18.6■□□□□ 0.57
SORT1-201ENST00000256637 HPDP32754 393 aaPredicted RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 TRPC7Q9HCX4 862 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 CTSHP09668 335 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 CPVLQ9H3G5 476 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 SERPINB13Q9UIV8 391 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 KIF2AO00139 706 aaPredicted RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 IFNB1P01574 187 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 TMEM62Q0P6H9 643 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 TMTC4Q5T4D3 741 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 POLR3EQ9NVU0 708 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 CNOT7Q9UIV1 285 aaKnown RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 SEMA3EO15041 775 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 SYT10Q6XYQ8 523 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 MYLK4Q86YV6 388 aaPredicted RBP18.59■□□□□ 0.57
SORT1-201ENST00000256637 RNF217Q8TC41 542 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 MGARPQ8TDB4 240 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 SLC7A3Q8WY07 619 aa18.59■□□□□ 0.57
SORT1-201ENST00000256637 AMNQ9BXJ7 453 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms