RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 DCP1AQ9NPI6 582 aaPredicted RBP10.24□□□□□ -0.77
PDE6A-201ENST00000255266 LMAN1P49257 510 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 CDC42EP1Q00587 391 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 HERC4Q5GLZ8 1057 aaPredicted RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 LIN9Q5TKA1 542 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 DPF2Q92785 391 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 NCOA5Q9HCD5 579 aaKnown RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 SH2B2O14492 632 aaPredicted RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 ZBTB5O15062 677 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 NEFHP12036 1026 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 LONP1P36776 959 aaKnown RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 TBC1D8BQ0IIM8 1120 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 UVSSAQ2YD98 709 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 CTNNBL1Q8WYA6 563 aaPredicted RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 PLIN2Q99541 437 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 ORC4O43929 436 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 INHBEP58166 350 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 NOSTRINQ8IVI9 506 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 NLRP7Q8WX94 980 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 RNF34Q969K3 372 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 OSBP2Q969R2 916 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 SYCE3A1L190 88 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 EXOC3O60645 756 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 SURF1Q15526 300 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 DCAF17Q5H9S7 520 aaPredicted RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 CDC42EP5Q6NZY7 148 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 GPBP1Q86WP2 473 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 CHST13Q8NET6 341 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 URGCPQ8TCY9 931 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 CACTINQ8WUQ7 758 aaKnown RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 RAVER2Q9HCJ3 691 aaKnown RBP10.23□□□□□ -0.77
PDE6A-201ENST00000255266 TBC1D22BQ9NU19 505 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 KCNJ14Q9UNX9 436 aa10.23□□□□□ -0.77
PDE6A-201ENST00000255266 KRT19P08727 400 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 KRT5P13647 590 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 SLC16A2P36021 539 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 ALCAMQ13740 583 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 TTC16Q8NEE8 873 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 PARP4Q9UKK3 1724 aaKnown RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 HMGCS2P54868 508 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 FAM177A1Q8N128 213 aaPredicted RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 NSUN4Q96CB9 384 aaKnown RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 KCNH3Q9ULD8 1083 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 ATRNO75882 1429 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 PAFAH1B1P43034 410 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 ORC2Q13416 577 aaPredicted RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 MTMR2Q13614 643 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 SBK1Q52WX2 424 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 SMIM5Q71RC9 77 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 MAEAQ7L5Y9 396 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 IQCDQ96DY2 449 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 NYAP2Q9P242 653 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 K7ENM7 598 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 ERLIN1O75477 346 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 NOP2P46087 812 aaKnown RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 INF2Q27J81 1249 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 NEK9Q8TD19 979 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 FOXP1Q9H334 677 aaPredicted RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 KIF28PB7ZC32 967 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 PI16Q6UXB8 463 aa10.22□□□□□ -0.77
PDE6A-201ENST00000255266 NAA15Q9BXJ9 866 aaKnown RBP10.22□□□□□ -0.77
PDE6A-201ENST00000255266 LRRIQ4A6NIV6 560 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 AKR1B10O60218 316 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 MCM3P25205 808 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 MAPK4P31152 587 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 SFNP31947 248 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 PTH1RQ03431 593 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 DNM1Q05193 864 aaKnown RBP10.21□□□□□ -0.77
PDE6A-201ENST00000255266 FAM160A1Q05DH4 1040 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 KIAA1841Q6NSI8 718 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 CCDC97Q96F63 343 aaPredicted RBP10.21□□□□□ -0.77
PDE6A-201ENST00000255266 MED10Q9BTT4 135 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 XRN1Q8IZH2 1706 aaKnown RBP10.21□□□□□ -0.77
PDE6A-201ENST00000255266 FKBP1BP68106 108 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 KRT76Q01546 638 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 NEDD1Q8NHV4 660 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 RMDN3Q96TC7 470 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 TEX13BQ9BXU2 312 aa10.21□□□□□ -0.77
PDE6A-201ENST00000255266 LSG1Q9H089 658 aaKnown RBP10.21□□□□□ -0.77
PDE6A-201ENST00000255266 GAS8O95995 478 aa10.21□□□□□ -0.78
PDE6A-201ENST00000255266 ACTN1P12814 892 aa10.21□□□□□ -0.78
PDE6A-201ENST00000255266 KCNJ6P48051 423 aa10.21□□□□□ -0.78
PDE6A-201ENST00000255266 ZNF827Q17R98 1081 aa10.21□□□□□ -0.78
PDE6A-201ENST00000255266 SAMD7Q7Z3H4 446 aa10.21□□□□□ -0.78
PDE6A-201ENST00000255266 FAM81BQ96LP2 452 aa10.21□□□□□ -0.78
PDE6A-201ENST00000255266 MAP2P11137 1827 aaKnown RBP10.21□□□□□ -0.78
PDE6A-201ENST00000255266 FLT1P17948 1338 aa10.21□□□□□ -0.78
PDE6A-201ENST00000255266 GOLGA6L10A0A0M3HER8 536 aa10.2□□□□□ -0.78
PDE6A-201ENST00000255266 MYCP01106 439 aaPredicted RBP10.2□□□□□ -0.78
PDE6A-201ENST00000255266 TFRCP02786 760 aaKnown RBP10.2□□□□□ -0.78
PDE6A-201ENST00000255266 RPLP2P05387 115 aaKnown RBP10.2□□□□□ -0.78
PDE6A-201ENST00000255266 RARBP10826 455 aa10.2□□□□□ -0.78
PDE6A-201ENST00000255266 BCRP11274 1271 aa10.2□□□□□ -0.78
PDE6A-201ENST00000255266 PDXDC2PQ6P474 469 aa10.2□□□□□ -0.78
PDE6A-201ENST00000255266 APOA5Q6Q788 366 aa10.2□□□□□ -0.78
PDE6A-201ENST00000255266 HOXC6P09630 235 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms