RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 PTPREP23469 700 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 CMA1P23946 247 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 INF2Q27J81 1249 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 USH1GQ495M9 461 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 CCDC183Q5T5S1 534 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 TEX2Q8IWB9 1127 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 ANKRD13AQ8IZ07 590 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
NIP7-202ENST00000254941 MRPS27Q92552 414 aaKnown RBP10.79□□□□□ -0.68
NIP7-202ENST00000254941 SLF1Q9BQI6 1058 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 RPAP3Q9H6T3 665 aaPredicted RBP10.79□□□□□ -0.68
NIP7-202ENST00000254941 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 FBXO2Q9UK22 296 aaPredicted RBP10.79□□□□□ -0.68
NIP7-202ENST00000254941 SRPRBQ9Y5M8 271 aaKnown RBP10.79□□□□□ -0.68
NIP7-202ENST00000254941 LOC285556D6RIA3 1793 aa10.79□□□□□ -0.68
NIP7-202ENST00000254941 RBBP6Q7Z6E9 1792 aaKnown RBP10.79□□□□□ -0.68
NIP7-202ENST00000254941 CUTAO60888 179 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 HMGCS2P54868 508 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 ZNF445P59923 1031 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 ATP2C1P98194 919 aaPredicted RBP10.78□□□□□ -0.68
NIP7-202ENST00000254941 PTGDRQ13258 359 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 SNW1Q13573 536 aaKnown RBP10.78□□□□□ -0.68
NIP7-202ENST00000254941 ZNF174Q15697 407 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 SH3D19Q5HYK7 790 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 JAKMIP3Q5VZ66 844 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 FSIP1Q8NA03 581 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
NIP7-202ENST00000254941 ENGASEQ8NFI3 743 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 TANGO6Q9C0B7 1094 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 GOLPH3LQ9H4A5 285 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 RRAGCQ9HB90 399 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 DDX19AQ9NUU7 478 aaKnown RBP10.78□□□□□ -0.68
NIP7-202ENST00000254941 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 CLEC11AQ9Y240 323 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 MEIS2O14770 477 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 OPLAHO14841 1288 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 FLOT1O75955 427 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 FDX1P10109 184 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 MCM7P33993 719 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 FAM160A1Q05DH4 1040 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 PPATQ06203 517 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 UBE2SQ16763 222 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 MCTP2Q6DN12 878 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 SHC4Q6S5L8 630 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 CCDC73Q6ZRK6 1079 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 NEK8Q86SG6 692 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 ERO1BQ86YB8 467 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 TBCKQ8TEA7 893 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 FERMT2Q96AC1 680 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 PPP1R9AQ9ULJ8 1098 aa10.78□□□□□ -0.68
NIP7-202ENST00000254941 A0A1B0GVL5 298 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L15C9J2P7 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L13C9JLJ4 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L11C9JVI0 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L18D6R9N7 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L22D6RA61 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L17D6RBQ6 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L19D6RCP7 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L20D6RJB6 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 PIK3CDO00329 1044 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 LETM1O95202 739 aaPredicted RBP10.77□□□□□ -0.69
NIP7-202ENST00000254941 ICAM1P05362 532 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L24Q0WX57 530 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 AP3B2Q13367 1082 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 ORC2Q13416 577 aaPredicted RBP10.77□□□□□ -0.69
NIP7-202ENST00000254941 TTLL12Q14166 644 aaPredicted RBP10.77□□□□□ -0.69
NIP7-202ENST00000254941 RESP18Q5W5W9 173 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.69
NIP7-202ENST00000254941 ARL6IP4Q66PJ3 421 aaKnown RBP10.77□□□□□ -0.69
NIP7-202ENST00000254941 CCDC174Q6PII3 467 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 USP17L6PQ6QN14 398 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 ARMC9Q7Z3E5 817 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 FMR1NBQ8N0W7 255 aaPredicted RBP10.77□□□□□ -0.69
NIP7-202ENST00000254941 C4orf32Q8N8J7 132 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 CLIC6Q96NY7 704 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 SLC38A10Q9HBR0 1119 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 TMOD4Q9NZQ9 345 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 MRVI1Q9Y6F6 885 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 ZNF536O15090 1300 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 TRPM7Q96QT4 1865 aa10.77□□□□□ -0.69
NIP7-202ENST00000254941 SPDYE5A6NIY4 337 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 LAD1O00515 517 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 NDUFA8P51970 172 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 LDLRAD1Q5T700 205 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 MOB2Q70IA6 237 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 LDHDQ86WU2 507 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 CLMNQ96JQ2 1002 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 NUP62CLQ9H1M0 184 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 HPSEQ9Y251 543 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 MRPL11Q9Y3B7 192 aaKnown RBP10.76□□□□□ -0.69
NIP7-202ENST00000254941 SYCE3A1L190 88 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 UNCXA6NJT0 531 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 TRAF5O00463 557 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 VWA5AO00534 786 aa10.76□□□□□ -0.69
NIP7-202ENST00000254941 IRF6O14896 467 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms