RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 SFMBT2Q5VUG0 894 aa19.45■□□□□ 0.7
NDFIP1-201ENST00000253814 TICAM2Q86XR7 235 aa19.45■□□□□ 0.7
NDFIP1-201ENST00000253814 LSM14BQ9BX40 385 aaKnown RBP19.45■□□□□ 0.7
NDFIP1-201ENST00000253814 SMARCAL1Q9NZC9 954 aa19.45■□□□□ 0.7
NDFIP1-201ENST00000253814 LGALS16A8MUM7 142 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 ERVK-24P63145 666 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 B4GALNT4Q76KP1 1039 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 KRT25Q7Z3Z0 450 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 CTNNBL1Q8WYA6 563 aaPredicted RBP19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 NCK2O43639 380 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 DPYDQ12882 1025 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 ALX1Q15699 326 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 JRKLQ9Y4A0 524 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 PPFIA4O75335 1185 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 CCDC25Q86WR0 208 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 CARD10Q9BWT7 1032 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 PCDHA4Q9UN74 947 aa19.44■□□□□ 0.7
NDFIP1-201ENST00000253814 TBCAO75347 108 aaKnown RBP19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 USP14P54578 494 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 PLS1Q14651 629 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 SRBD1Q8N5C6 995 aaKnown RBP19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 ARFGAP2Q8N6H7 521 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 SEMA3EO15041 775 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 HEXIM1O94992 359 aaKnown RBP19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 TRAPPC10P48553 1259 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 IFI16Q16666 785 aaKnown RBP19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 NFRKBQ6P4R8 1299 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 KIF11P52732 1056 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 RPS6KA1Q15418 735 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 EARS2Q5JPH6 523 aaKnown RBP19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 NAA35Q5VZE5 725 aa19.43■□□□□ 0.7
NDFIP1-201ENST00000253814 CCNE1P24864 410 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 PRDX5P30044 214 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 NEK8Q86SG6 692 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 KANSL2Q9H9L4 492 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 FAM217BQ9NTX9 383 aaPredicted RBP19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 PPP1R3GB7ZBB8 358 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 ZNF18P17022 549 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 KLK7P49862 253 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 GSTO1P78417 241 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 ASIC2Q16515 512 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 RSRC2Q7L4I2 434 aaKnown RBP19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 ARPP21Q9UBL0 812 aaPredicted RBP19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 GSTTP1A0A1W2PQM5 241 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 USP17L2Q6R6M4 530 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 CABS1Q96KC9 395 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 NFU1Q9UMS0 254 aa19.42■□□□□ 0.7
NDFIP1-201ENST00000253814 AGLP35573 1532 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 C3P01024 1663 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 SMIM22K7EJ46 135 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 CSF1RP07333 972 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 CRKLP46109 303 aaKnown RBP19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 GBP6Q6ZN66 633 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 CCDC65Q8IXS2 484 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 SYCP3Q8IZU3 236 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 ANKZF1Q9H8Y5 726 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 TMEM51Q9NW97 253 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 DUSP10Q9Y6W6 482 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 FCER1AP12319 257 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 DIXDC1Q155Q3 683 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 TPTE2Q6XPS3 522 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 SLC44A5Q8NCS7 719 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 EYA3Q99504 573 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 ZNF219Q9P2Y4 722 aaPredicted RBP19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 PCDHA13Q9Y5I0 950 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 ABCC12Q96J65 1359 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 IL6STP40189 918 aaPredicted RBP19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 ATP2C1P98194 919 aaPredicted RBP19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 UHMK1Q8TAS1 419 aaKnown RBP19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 DHTKD1Q96HY7 919 aaPredicted RBP19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 FAM184BQ9ULE4 1060 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 L1RE1Q9UN81 338 aa19.41■□□□□ 0.7
NDFIP1-201ENST00000253814 LRRIQ3A6PVS8 624 aaPredicted RBP19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 CETN3O15182 167 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 NEFHP12036 1026 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 PPP1R2P41236 205 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 TRIM28Q13263 835 aaKnown RBP19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 KRT71Q3SY84 523 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 COG1Q8WTW3 980 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 DPH5Q9H2P9 285 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.4■□□□□ 0.79e-15■■■■■ 186.3
NDFIP1-201ENST00000253814 SLAIN2Q9P270 581 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 LCMT1Q9UIC8 334 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 CTDP1Q9Y5B0 961 aaPredicted RBP19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 A0A087X0B3 334 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 ABL1P00519 1130 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 MECOMQ03112 1051 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 LRRC47Q8N1G4 583 aaKnown RBP19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 TBCKQ8TEA7 893 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 GCOM1H8Y6P7 765 aaPredicted RBP19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 MYZAPP0CAP1 466 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 DAAM2Q86T65 1068 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 KIFC2Q96AC6 838 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 NDST4Q9H3R1 872 aa19.4■□□□□ 0.7
NDFIP1-201ENST00000253814 GOLGA8KD6RF30 607 aa19.39■□□□□ 0.7
NDFIP1-201ENST00000253814 RIMBP2O15034 1052 aa19.39■□□□□ 0.7
NDFIP1-201ENST00000253814 CTNNA1P35221 906 aaKnown RBP19.39■□□□□ 0.7
NDFIP1-201ENST00000253814 MAGEA9P43362 315 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms