RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 PIGSQ96S52 555 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 CXorf56Q9H5V9 222 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 USP21Q9UK80 565 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 ZBTB21Q9ULJ3 1066 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 B4DLN1 442 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
SOX9-201ENST00000245479 PTPREP23469 700 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 GCKP35557 465 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 LIFRP42702 1097 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 TRIM28Q13263 835 aaKnown RBP12.81□□□□□ -0.36
SOX9-201ENST00000245479 NEDD9Q14511 834 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 PTPAQ15257 358 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 BLIDQ8IZY5 108 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 RPGRIP1Q96KN7 1286 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 N4BP1O75113 896 aaKnown RBP12.81□□□□□ -0.36
SOX9-201ENST00000245479 PEX19P40855 299 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 VSNL1P62760 191 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 FMNL3Q8IVF7 1028 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 FUT8Q9BYC5 575 aa12.81□□□□□ -0.36
SOX9-201ENST00000245479 ZC3H12CQ9C0D7 883 aaKnown RBP12.81□□□□□ -0.36
SOX9-201ENST00000245479 GOLGA6L10A0A0M3HER8 536 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 IFT88Q13099 833 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 PAK1Q13153 545 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 TRIM14Q14142 442 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 ANKS4BQ8N8V4 417 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 HDAC6Q9UBN7 1215 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 FBXO2Q9UK22 296 aaPredicted RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 SORBS3O60504 671 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 BUB1BO60566 1050 aaPredicted RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 RPSAP08865 295 aaKnown RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 KCNJ6P48051 423 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 NCAPHQ15003 741 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 CCDC40Q4G0X9 1142 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 N4BP2L2Q92802 583 aaPredicted RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 CCDC51Q96ER9 411 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 PSD3Q9NYI0 1048 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 TLDC2A0PJX2 215 aa12.8□□□□□ -0.36
SOX9-201ENST00000245479 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 SECISBP2LQ93073 1101 aaKnown RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 GEMIN8Q9NWZ8 242 aaKnown RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 EPN1Q9Y6I3 576 aaPredicted RBP12.8□□□□□ -0.36
SOX9-201ENST00000245479 PPP6R2O75170 966 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 NTSR2O95665 410 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 ABL1P00519 1130 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 CYP4A11Q02928 519 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
SOX9-201ENST00000245479 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 TEX2Q8IWB9 1127 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
SOX9-201ENST00000245479 TCRBV5S4A2TA0A5A2 114 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 GOLGA8KD6RF30 607 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 KLK7P49862 253 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 SP4Q02446 784 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 MORC3Q14149 939 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 FBXW10Q5XX13 1052 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 OR8K1Q8NGG5 319 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 MICAL1Q8TDZ2 1067 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 CHP1Q99653 195 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 TMEM60Q9H2L4 133 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 HAUS4Q9H6D7 363 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 POTEMA6NI47 508 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 KCNJ18B7U540 433 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 KCNJ12Q14500 433 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 FAM114A1Q8IWE2 563 aa12.79□□□□□ -0.36
SOX9-201ENST00000245479 GSPT2Q8IYD1 628 aaKnown RBP12.79□□□□□ -0.36
SOX9-201ENST00000245479 MRPL44Q9H9J2 332 aaKnown RBP12.79□□□□□ -0.36
SOX9-201ENST00000245479 CAMTA1Q9Y6Y1 1673 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 SLIT1O75093 1534 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 SMIM23A6NLE4 172 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 MEIS1O00470 390 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 GUCY2FP51841 1108 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 STAG1Q8WVM7 1258 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 NSUN4Q96CB9 384 aaKnown RBP12.78□□□□□ -0.36
SOX9-201ENST00000245479 SELENOSQ9BQE4 189 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 NOC4LQ9BVI4 516 aaKnown RBP12.78□□□□□ -0.36
SOX9-201ENST00000245479 CEP83Q9Y592 693 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 H3BQF6 201 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 SASH3O75995 380 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 FCER1AP12319 257 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 DNAAF5Q86Y56 855 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 SRPRBQ9Y5M8 271 aaKnown RBP12.78□□□□□ -0.36
SOX9-201ENST00000245479 JCADQ9P266 1359 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 AKAP12Q02952 1782 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 DDX39AO00148 427 aaKnown RBP12.78□□□□□ -0.36
SOX9-201ENST00000245479 BUB1O43683 1085 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 FXR1P51114 621 aaKnown RBP eCLIP12.78□□□□□ -0.36
SOX9-201ENST00000245479 CCDC50Q8IVM0 306 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 IFT20Q8IY31 132 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 UBLCP1Q8WVY7 318 aaPredicted RBP12.78□□□□□ -0.36
SOX9-201ENST00000245479 CALML4Q96GE6 196 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
SOX9-201ENST00000245479 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
SOX9-201ENST00000245479 NFAT5O94916 1531 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms