RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 SPATA1Q5VX52 437 aa17.57■□□□□ 0.4
TMEM30A-201ENST00000230461 LARSQ9P2J5 1176 aaKnown RBP17.57■□□□□ 0.4
TMEM30A-201ENST00000230461 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
TMEM30A-201ENST00000230461 MLXIPQ9HAP2 919 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 CTAGE9A4FU28 777 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 ANTXR2P58335 489 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 MORC3Q14149 939 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 VWA3BQ502W6 1294 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 CCDC102AQ96A19 550 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 IWS1Q96ST2 819 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 PANK4Q9NVE7 773 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 PCDHB13Q9Y5F0 798 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 SLIT3O75094 1523 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 POTEB2H3BUK9 544 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 PIK3C2AO00443 1686 aa17.56■□□□□ 0.4
TMEM30A-201ENST00000230461 GPR75-ASB3A0A0A6YYF3 556 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 DPCR1Q3MIW9 517 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 CTNNBL1Q8WYA6 563 aaPredicted RBP17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 ANO3Q9BYT9 981 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 SLC39A2Q9NP94 309 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 ANKRD62A6NC57 917 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 IREB2P48200 963 aaKnown RBP17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 CKAP4Q07065 602 aaKnown RBP17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 XKR9Q5GH70 373 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 EPSTI1Q96J88 318 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 WDR11Q9BZH6 1224 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 SPON1Q9HCB6 807 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 CLEC17AQ6ZS10 378 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 OXER1Q8TDS5 423 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 SYNCQ9H7C4 482 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 ERCC5P28715 1186 aaPredicted RBP17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 ARMC9Q7Z3E5 817 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 LMBR1Q8WVP7 490 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 MXD3Q9BW11 206 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 PLVAPQ9BX97 442 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 RABGAP1Q9Y3P9 1069 aa17.55■□□□□ 0.4
TMEM30A-201ENST00000230461 KCNJ18B7U540 433 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 PPP4CP60510 307 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 KCNJ12Q14500 433 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 ZNF569Q5MCW4 686 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 CYP26C1Q6V0L0 522 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 TMTC1Q8IUR5 882 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 FAM178BQ8IXR5 827 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 STK17AQ9UEE5 414 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 CTAGE15A4D2H0 777 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 CTAGE8P0CG41 777 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 KCTD2Q14681 263 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 LONRF3Q496Y0 759 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 CCDC122Q5T0U0 273 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 SYT10Q6XYQ8 523 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 CTAGE6Q86UF2 777 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 TXNRD3Q86VQ6 643 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 CTAGE4Q8IX94 777 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 MRFAP1L1Q96HT8 127 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 GINS2Q9Y248 185 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 GNA14O95837 355 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 SRGNP10124 158 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 SNAP25P60880 206 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 SLC5A4Q9NY91 659 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 POLLQ9UGP5 575 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 FSD2A1L4K1 749 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 USP17L10C9JJH3 530 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 DPEP1P16444 411 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 DNM2P50570 870 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 WDR44Q5JSH3 913 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 FAM83BQ5T0W9 1011 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 GRAMD1CQ8IYS0 662 aa17.54■□□□□ 0.4
TMEM30A-201ENST00000230461 KCNB2Q92953 911 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 HOXA13P31271 388 aaPredicted RBP17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 APBB1IPQ7Z5R6 666 aaPredicted RBP17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 BARHL2Q9NY43 387 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 MTMR4Q9NYA4 1195 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 CTNNA2P26232 953 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 PRPHP41219 470 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 STAG2Q8N3U4 1231 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 SRBD1Q8N5C6 995 aaKnown RBP17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 PPP1R9BQ96SB3 815 aa17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 CGNQ9P2M7 1197 aaKnown RBP17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
TMEM30A-201ENST00000230461 ENTPD3O75355 529 aa17.52■□□□□ 0.4
TMEM30A-201ENST00000230461 MYL1P05976 194 aa17.52■□□□□ 0.4
TMEM30A-201ENST00000230461 HLTFQ14527 1009 aaKnown RBP eCLIP17.52■□□□□ 0.4
TMEM30A-201ENST00000230461 A0A087WWV3 80 aa17.52■□□□□ 0.4
TMEM30A-201ENST00000230461 SLU7O95391 586 aaKnown RBP17.52■□□□□ 0.39
TMEM30A-201ENST00000230461 CCNA1P78396 465 aa17.52■□□□□ 0.39
TMEM30A-201ENST00000230461 RNF181Q9P0P0 153 aa17.52■□□□□ 0.39
TMEM30A-201ENST00000230461 RSBN1LQ6PCB5 846 aaPredicted RBP17.52■□□□□ 0.39
TMEM30A-201ENST00000230461 SLC9C1Q4G0N8 1177 aa17.51■□□□□ 0.39
TMEM30A-201ENST00000230461 FAM102BQ5T8I3 360 aa17.51■□□□□ 0.39
TMEM30A-201ENST00000230461 C11orf57Q6ZUT1 292 aaPredicted RBP17.51■□□□□ 0.39
TMEM30A-201ENST00000230461 APOBEC3FQ8IUX4 373 aaKnown RBP17.51■□□□□ 0.39
TMEM30A-201ENST00000230461 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms