RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 STX1AQ16623 288 aa12.18□□□□□ -0.46
CDCA3-201ENST00000229265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-201ENST00000229265 RAB11FIP4Q86YS3 637 aa12.18□□□□□ -0.46
CDCA3-201ENST00000229265 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-201ENST00000229265 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-201ENST00000229265 AIFM3Q96NN9 605 aa12.18□□□□□ -0.46
CDCA3-201ENST00000229265 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
CDCA3-201ENST00000229265 PI4KBQ9UBF8 816 aa12.18□□□□□ -0.46
CDCA3-201ENST00000229265 MAD2L2Q9UI95 211 aa12.18□□□□□ -0.46
CDCA3-201ENST00000229265 MRVI1Q9Y6F6 885 aa12.18□□□□□ -0.46
CDCA3-201ENST00000229265 COL2A1P02458 1487 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-201ENST00000229265 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
CDCA3-201ENST00000229265 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 IGKV6D-41A0A0C4DH26 115 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 A0A0G2JLL6 359 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-201ENST00000229265 GOLGA6L6A8MZA4 724 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 ESPNB1AK53 854 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 GDF11O95390 407 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-201ENST00000229265 GNA11P29992 359 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 ZNF165P49910 485 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 TOB1P50616 345 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-201ENST00000229265 NDUFA8P51970 172 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 NLRP5P59047 1200 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 MCTP2Q6DN12 878 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-201ENST00000229265 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 CLEC10AQ8IUN9 316 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 TNFRSF25Q93038 417 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 TRIM47Q96LD4 638 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 CABP5Q9NP86 173 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 TUBE1Q9UJT0 475 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 GABRQQ9UN88 632 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
CDCA3-201ENST00000229265 RLFQ13129 1914 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 ESYT2A0FGR8 921 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 SMTNL1A8MU46 457 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 TLR2O60603 784 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 TTLL1O95922 423 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
CDCA3-201ENST00000229265 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 BCRP11274 1271 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 CETPP11597 493 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 SP3Q02447 781 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 SNAPC2Q13487 334 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 CAMK4Q16566 473 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 GPATCH4Q5T3I0 446 aaKnown RBP12.16□□□□□ -0.46
CDCA3-201ENST00000229265 DCAF15Q66K64 600 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
CDCA3-201ENST00000229265 BLIDQ8IZY5 108 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 SLC44A5Q8NCS7 719 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 SH3TC2Q8TF17 1288 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 DYNLL2Q96FJ2 89 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 KCNH3Q9ULD8 1083 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 PCDHA4Q9UN74 947 aa12.16□□□□□ -0.46
CDCA3-201ENST00000229265 KIAA0100Q14667 2235 aaKnown RBP12.16□□□□□ -0.46
CDCA3-201ENST00000229265 TCHHQ07283 1943 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 A0A1B0GVL5 298 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 TBC1D12O60347 775 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 PFKFB1P16118 471 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 CLCN1P35523 988 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 CAP2P40123 477 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 INHBEP58166 350 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 NLRP12P59046 1061 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 TRAF1Q13077 416 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 NT5DC1Q5TFE4 455 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 SHC4Q6S5L8 630 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 SARM1Q6SZW1 724 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 ANKRD23Q86SG2 305 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 TRIML1Q8N9V2 468 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 RRP36Q96EU6 259 aaKnown RBP12.15□□□□□ -0.46
CDCA3-201ENST00000229265 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.46
CDCA3-201ENST00000229265 ZMYND12Q9H0C1 365 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 GOLPH3LQ9H4A5 285 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDCA3-201ENST00000229265 C6orf50Q9HD87 102 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 NYAP2Q9P242 653 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-201ENST00000229265 STX8Q9UNK0 236 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 KCNJ14Q9UNX9 436 aa12.15□□□□□ -0.46
CDCA3-201ENST00000229265 GOLGA6L19H0YKK7 550 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 M0R2N6 131 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 IKBKBO14920 756 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 NMT2O60551 498 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 EN2P19622 333 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-201ENST00000229265 CDC25BP30305 580 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 FOSBP53539 338 aa12.14□□□□□ -0.47
CDCA3-201ENST00000229265 TPM4P67936 248 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms