RNA–Protein interactions for RNA: ENST00000227667.7

APOC3-201, Transcript of apolipoprotein C3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC3, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-201ENST00000227667 DYNC1LI2O43237 492 aaPredicted RBP12.96□□□□□ -0.33
APOC3-201ENST00000227667 SUPT20HL2P0C7V6 817 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 AKR1B1P15121 316 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 FOXK2Q01167 660 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 FAM83BQ5T0W9 1011 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 HFE2Q6ZVN8 426 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 TLK2Q86UE8 772 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 CCDC144CPQ8IYA2 1237 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 ALDH8A1Q9H2A2 487 aaPredicted RBP12.96□□□□□ -0.33
APOC3-201ENST00000227667 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 GPR108Q9NPR9 543 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 SWAP70Q9UH65 585 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 FOCADQ5VW36 1801 aa12.96□□□□□ -0.33
APOC3-201ENST00000227667 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
APOC3-201ENST00000227667 CYP2D6P10635 497 aa12.95□□□□□ -0.34
APOC3-201ENST00000227667 EEF2P13639 858 aaKnown RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 CPXCR1Q8N123 301 aa12.95□□□□□ -0.34
APOC3-201ENST00000227667 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
APOC3-201ENST00000227667 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 ZBED2Q9BTP6 218 aa12.95□□□□□ -0.34
APOC3-201ENST00000227667 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 TRMT13Q9NUP7 481 aaKnown RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 MTUS1Q9ULD2 1270 aa12.95□□□□□ -0.34
APOC3-201ENST00000227667 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 ZNFX1Q9P2E3 1918 aaKnown RBP12.95□□□□□ -0.34
APOC3-201ENST00000227667 CDK5RAP2Q96SN8 1893 aa12.95□□□□□ -0.34
APOC3-201ENST00000227667 LCHNA4D1U4 455 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 RFC2P35250 354 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
APOC3-201ENST00000227667 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
APOC3-201ENST00000227667 CCDC17Q96LX7 622 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 FGD4Q96M96 766 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 SLF1Q9BQI6 1058 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 LNPKQ9C0E8 428 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 KATNBL1Q9H079 304 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 SUGCTQ9HAC7 445 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 GNEQ9Y223 722 aaKnown RBP12.94□□□□□ -0.34
APOC3-201ENST00000227667 MYH1P12882 1939 aa12.94□□□□□ -0.34
APOC3-201ENST00000227667 TNKSO95271 1327 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 ZBED4O75132 1171 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 PTGS1P23219 599 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 KCNJ6P48051 423 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 C8orf34Q49A92 452 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 RETREG2Q8NC44 543 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 ANTXR1Q9H6X2 564 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 KANSL2Q9H9L4 492 aa12.93□□□□□ -0.34
APOC3-201ENST00000227667 SALL3Q9BXA9 1300 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 H3BQ06 376 aaPredicted RBP12.92□□□□□ -0.34
APOC3-201ENST00000227667 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 SMPD1P17405 629 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 PTPN5P54829 565 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 CNTN2Q02246 1040 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
APOC3-201ENST00000227667 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
APOC3-201ENST00000227667 RAVER2Q9HCJ3 691 aaKnown RBP12.92□□□□□ -0.34
APOC3-201ENST00000227667 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
APOC3-201ENST00000227667 FBXO40Q9UH90 709 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 DBNLQ9UJU6 430 aaKnown RBP12.92□□□□□ -0.34
APOC3-201ENST00000227667 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
APOC3-201ENST00000227667 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
APOC3-201ENST00000227667 BAIAP3O94812 1187 aa12.91□□□□□ -0.34
APOC3-201ENST00000227667 TMCO2Q7Z6W1 182 aaPredicted RBP12.91□□□□□ -0.34
APOC3-201ENST00000227667 PLEKHM2Q8IWE5 1019 aa12.91□□□□□ -0.34
APOC3-201ENST00000227667 PRSS33Q8NF86 280 aa12.91□□□□□ -0.34
APOC3-201ENST00000227667 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
APOC3-201ENST00000227667 UPF3BQ9BZI7 483 aaKnown RBP12.91□□□□□ -0.34
APOC3-201ENST00000227667 CCDC8Q9H0W5 538 aaPredicted RBP12.91□□□□□ -0.34
APOC3-201ENST00000227667 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
APOC3-201ENST00000227667 FAM50BQ9Y247 325 aa12.91□□□□□ -0.34
APOC3-201ENST00000227667 BRWD1Q9NSI6 2320 aa12.91□□□□□ -0.34
APOC3-201ENST00000227667 ASB14A6NK59 587 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 GFRA3O60609 400 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 CDK8P49336 464 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 ERVK-21P61565 698 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 ZP2Q05996 745 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 FAM47CQ5HY64 1035 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 IQSEC1Q6DN90 963 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 EP400NLQ6ZTU2 488 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
APOC3-201ENST00000227667 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 NEK9Q8TD19 979 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
APOC3-201ENST00000227667 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 OSBPL3Q9H4L5 887 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 PDGFCQ9NRA1 345 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 PRKAG3Q9UGI9 489 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 Q9Y3F1 56 aa12.9□□□□□ -0.34
APOC3-201ENST00000227667 ZFHX2Q9C0A1 2572 aaPredicted RBP12.9□□□□□ -0.34
APOC3-201ENST00000227667 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
APOC3-201ENST00000227667 SMARCA5O60264 1052 aaPredicted RBP12.89□□□□□ -0.35
APOC3-201ENST00000227667 SURF6O75683 361 aaKnown RBP12.89□□□□□ -0.35
APOC3-201ENST00000227667 WDR5P61964 334 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms