RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 STAMQ92783 540 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 MRIQ9BWK5 157 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 RWDD2AQ9UIY3 292 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 ADGRG1Q9Y653 693 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 ITIH6Q6UXX5 1313 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 GREB1LQ9C091 1923 aaPredicted RBP24.98■■□□□ 1.59
CCDC9-201ENST00000221922 hCG_1984214I3L0E3 225 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 MYL1P05976 194 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 FECHP22830 423 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 RRAGBQ5VZM2 374 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 USP17L2Q6R6M4 530 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 RASGRP2Q7LDG7 609 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 CREBRFQ8IUR6 639 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 SMYD4Q8IYR2 804 aaPredicted RBP24.98■■□□□ 1.59
CCDC9-201ENST00000221922 ZNF713Q8N859 430 aaPredicted RBP24.98■■□□□ 1.59
CCDC9-201ENST00000221922 MTRQ99707 1265 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 CCSER1Q9C0I3 900 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 CTNND2Q9UQB3 1225 aa24.98■■□□□ 1.59
CCDC9-201ENST00000221922 RPN1P04843 607 aaKnown RBP24.97■■□□□ 1.59
CCDC9-201ENST00000221922 PLA2G4AP47712 749 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 SOGA3Q5TF21 947 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 RAD9BQ6WBX8 426 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 ZDHHC15Q96MV8 337 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 LRRC10BA6NIK2 292 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 MFAP3LO75121 409 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 UBA7P41226 1012 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 SPAG1Q07617 926 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 NONOQ15233 471 aaKnown RBP eCLIP24.97■■□□□ 1.59
CCDC9-201ENST00000221922 STRIP1Q5VSL9 837 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 CCDC51Q96ER9 411 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 TMEM60Q9H2L4 133 aa24.97■■□□□ 1.59
CCDC9-201ENST00000221922 PDHBP11177 359 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 AKR1B1P15121 316 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 CRKP46108 304 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 PAK1Q13153 545 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 ORC2Q13416 577 aaPredicted RBP24.96■■□□□ 1.59
CCDC9-201ENST00000221922 KARSQ15046 597 aaKnown RBP24.96■■□□□ 1.59
CCDC9-201ENST00000221922 RASSF8Q8NHQ8 419 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 AK8Q96MA6 479 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 DBNDD1Q9H9R9 158 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 ST7Q9NRC1 585 aa24.96■■□□□ 1.59
CCDC9-201ENST00000221922 ESYT2A0FGR8 921 aa24.95■■□□□ 1.59
CCDC9-201ENST00000221922 SMCO2A6NFE2 343 aa24.95■■□□□ 1.59
CCDC9-201ENST00000221922 SNHG28P0DPA3 235 aa24.95■■□□□ 1.59
CCDC9-201ENST00000221922 HDLBPQ00341 1268 aaKnown RBP24.95■■□□□ 1.59
CCDC9-201ENST00000221922 ASPRV1Q53RT3 343 aa24.95■■□□□ 1.59
CCDC9-201ENST00000221922 RABGGTAQ92696 567 aa24.95■■□□□ 1.59
CCDC9-201ENST00000221922 EHD4Q9H223 541 aa24.95■■□□□ 1.59
CCDC9-201ENST00000221922 RIOX1Q9H6W3 641 aa24.95■■□□□ 1.59
CCDC9-201ENST00000221922 LIMA1Q9UHB6 759 aaKnown RBP24.95■■□□□ 1.59
CCDC9-201ENST00000221922 USP17L5A8MUK1 530 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 HLA-DOAP06340 250 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 CNGA4Q8IV77 575 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 ANKRD20A12PQ8NF67 263 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 CPVLQ9H3G5 476 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 CUEDC2Q9H467 287 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 MAGEF1Q9HAY2 307 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 SCN9AQ15858 1988 aa24.95■■□□□ 1.58
CCDC9-201ENST00000221922 SHMT1P34896 483 aa24.94■■□□□ 1.58
CCDC9-201ENST00000221922 CNKSR1Q969H4 720 aa24.94■■□□□ 1.58
CCDC9-201ENST00000221922 RGS17Q9UGC6 210 aaPredicted RBP24.94■■□□□ 1.58
CCDC9-201ENST00000221922 GYPCP04921 128 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 OR52Z1P0C646 297 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 TTLL1O95922 423 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 CDC25AP30304 524 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 KCNB1Q14721 858 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 DACT2Q5SW24 774 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 NEK8Q86SG6 692 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 CPLX3Q8WVH0 158 aa24.93■■□□□ 1.58
CCDC9-201ENST00000221922 ECE2O60344 883 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 CASP14P31944 242 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 SLC15A2Q16348 729 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 NAALADL2Q58DX5 795 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 CC2D1AQ6P1N0 951 aaPredicted RBP24.92■■□□□ 1.58
CCDC9-201ENST00000221922 NELFBQ8WX92 580 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 PIGSQ96S52 555 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 UBXN6Q9BZV1 441 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 KCNQ5Q9NR82 932 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 KRT31Q15323 416 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 GOLGA1Q92805 767 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 IRX2Q9BZI1 471 aaPredicted RBP24.92■■□□□ 1.58
CCDC9-201ENST00000221922 SIPA1L1O43166 1804 aa24.92■■□□□ 1.58
CCDC9-201ENST00000221922 FXR1P51114 621 aaKnown RBP eCLIP24.91■■□□□ 1.58
CCDC9-201ENST00000221922 NFIAQ12857 509 aa24.91■■□□□ 1.58
CCDC9-201ENST00000221922 TEX35Q5T0J7 233 aa24.91■■□□□ 1.58
CCDC9-201ENST00000221922 REXO1Q8N1G1 1221 aaKnown RBP24.91■■□□□ 1.58
CCDC9-201ENST00000221922 EPC1Q9H2F5 836 aa24.91■■□□□ 1.58
CCDC9-201ENST00000221922 LZTFL1Q9NQ48 299 aa24.91■■□□□ 1.58
CCDC9-201ENST00000221922 KBTBD4Q9NVX7 518 aa24.91■■□□□ 1.58
CCDC9-201ENST00000221922 KIF5CO60282 957 aa24.9■■□□□ 1.58
CCDC9-201ENST00000221922 CCNT1O60563 726 aaKnown RBP24.9■■□□□ 1.58
CCDC9-201ENST00000221922 LETM2Q2VYF4 491 aa24.9■■□□□ 1.58
CCDC9-201ENST00000221922 LRRC47Q8N1G4 583 aaKnown RBP24.9■■□□□ 1.58
CCDC9-201ENST00000221922 C7orf43Q8WVR3 580 aa24.9■■□□□ 1.58
CCDC9-201ENST00000221922 VAT1LQ9HCJ6 419 aa24.9■■□□□ 1.58
CCDC9-201ENST00000221922 SEC31AO94979 1220 aaKnown RBP24.9■■□□□ 1.58
CCDC9-201ENST00000221922 TBC1D8O95759 1140 aa24.9■■□□□ 1.58
CCDC9-201ENST00000221922 STIM1Q13586 685 aa24.9■■□□□ 1.58
CCDC9-201ENST00000221922 TUBB2AQ13885 445 aa24.9■■□□□ 1.58
CCDC9-201ENST00000221922 CCDC17Q96LX7 622 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms