RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 A0A1W2PQ27 194 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 A0A1W2PQ64 194 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 A0A1W2PQD8 194 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 RGL2O15211 777 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 CFAP100Q494V2 611 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 KRT40Q6A162 431 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 CC2D2BQ6DHV5 1058 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 FMR1NBQ8N0W7 255 aaPredicted RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 TRIM58Q8NG06 486 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 RASSF8Q8NHQ8 419 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 KCNG4Q8TDN1 519 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 SDR42E1Q8WUS8 393 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 DPF2Q92785 391 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 FAM84BQ96KN1 310 aaPredicted RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 DESI2Q9BSY9 194 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 ACTR5Q9H9F9 607 aaPredicted RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 MRPL44Q9H9J2 332 aaKnown RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 SLC12A7Q9Y666 1083 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 A0A1B0GVL5 298 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 UBE2Q2LH0YL09 131 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 BIN1O00499 593 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 KIF5CO60282 957 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 RPS6KA4O75676 772 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 SERPINC1P01008 464 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 WHAMMP3Q1A5X7 153 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 RC3H1Q5TC82 1133 aaKnown RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 CCDC148Q8NFR7 591 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 FAM81AQ8TBF8 368 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 SDF4Q9BRK5 362 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 ZKSCAN3Q9BRR0 538 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 GOLGA6BA6NDN3 693 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 SPTLC2O15270 562 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 TFRCP02786 760 aaKnown RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 IARSP41252 1262 aaKnown RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 AKAP17AQ02040 695 aaKnown RBP15.16■□□□□ 0.02
GABPB1-201ENST00000220429 ANO1Q5XXA6 986 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 SYNE3Q6ZMZ3 975 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 VPS37DQ86XT2 251 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 MAF1Q9H063 256 aa15.16■□□□□ 0.02
GABPB1-201ENST00000220429 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 CTAGE9A4FU28 777 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 NDUFA8P51970 172 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 SKOR1P84550 965 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 MKL1Q969V6 931 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 RIOK1Q9BRS2 568 aaKnown RBP15.15■□□□□ 0.02
GABPB1-201ENST00000220429 LZTFL1Q9NQ48 299 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.15■□□□□ 0.02
GABPB1-201ENST00000220429 MYH6P13533 1939 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 NID2Q14112 1375 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 SMIM22K7EJ46 135 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 KLRK1P26718 216 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 ROR2Q01974 943 aaKnown RBP15.15■□□□□ 0.02
GABPB1-201ENST00000220429 PPARAQ07869 468 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 IFT88Q13099 833 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 PDCLQ13371 301 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 CAVIN4Q5BKX8 364 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 FAM182BQ5T319 152 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 NAA35Q5VZE5 725 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 AMIGO3Q86WK7 504 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 FNBP4Q8N3X1 1017 aaPredicted RBP15.15■□□□□ 0.02
GABPB1-201ENST00000220429 ZNF384Q8TF68 577 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 GDAP1L1Q96MZ0 367 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 PAPOLBQ9NRJ5 636 aaKnown RBP15.15■□□□□ 0.02
GABPB1-201ENST00000220429 GGA2Q9UJY4 613 aa15.15■□□□□ 0.02
GABPB1-201ENST00000220429 GOLGA8KD6RF30 607 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 GNPATO15228 680 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 CCDC175P0C221 793 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 TPP2P29144 1249 aaPredicted RBP15.14■□□□□ 0.01
GABPB1-201ENST00000220429 TSHZ1Q6ZSZ6 1077 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 ARHGAP22Q7Z5H3 698 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 CCDC24Q8N4L8 307 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 ALS2CR12Q96Q35 445 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 SETDB2Q96T68 719 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 EBF2Q9HAK2 575 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 KIAA1468Q9P260 1216 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 STK36Q9NRP7 1315 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 THSD7AQ9UPZ6 1657 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 BUB1BO60566 1050 aaPredicted RBP15.14■□□□□ 0.01
GABPB1-201ENST00000220429 GCLCP48506 637 aaPredicted RBP15.14■□□□□ 0.01
GABPB1-201ENST00000220429 ZNF569Q5MCW4 686 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 SLC26A6Q9BXS9 759 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 NYXQ9GZU5 481 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 RMI1Q9H9A7 625 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 HAUS2Q9NVX0 235 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 FANCLQ9NW38 375 aa15.14■□□□□ 0.01
GABPB1-201ENST00000220429 HOOK1Q9UJC3 728 aaKnown RBP15.14■□□□□ 0.01
GABPB1-201ENST00000220429 UBAP1LF5GYI3 381 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 IKBKBO14920 756 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 FERP16591 822 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 RPS8P62241 208 aaKnown RBP15.13■□□□□ 0.01
GABPB1-201ENST00000220429 MYO1EQ12965 1108 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 WTAPQ15007 396 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 FBXO33Q7Z6M2 555 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 PDILTQ8N807 584 aa15.13■□□□□ 0.01
GABPB1-201ENST00000220429 NLRP3Q96P20 1036 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms