RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CCZ1BP86790 482 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 CCZ1P86791 482 aaPredicted RBP11.26□□□□□ -0.61
USP11-201ENST00000218348 IKQ13123 557 aaPredicted RBP11.26□□□□□ -0.61
USP11-201ENST00000218348 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 SPTLC3Q9NUV7 552 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 GDAQ9Y2T3 454 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 PSMD14O00487 310 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
USP11-201ENST00000218348 STAT6P42226 847 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 TNNI2P48788 182 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
USP11-201ENST00000218348 NUP88Q99567 741 aaPredicted RBP11.25□□□□□ -0.61
USP11-201ENST00000218348 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 SERPINB13Q9UIV8 391 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 SUGT1Q9Y2Z0 365 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 TEX33O43247 280 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 PLCG2P16885 1265 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 TECP42680 631 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 TXKP42681 527 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 ZNF280AP59817 542 aaPredicted RBP11.25□□□□□ -0.61
USP11-201ENST00000218348 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
USP11-201ENST00000218348 DPYDQ12882 1025 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 HPS3Q969F9 1004 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 TEKT1Q969V4 418 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 MTRQ99707 1265 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 TDRD3Q9H7E2 651 aaKnown RBP11.25□□□□□ -0.61
USP11-201ENST00000218348 NID2Q14112 1375 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
USP11-201ENST00000218348 SLFN14P0C7P3 912 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 CALML3P27482 149 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 UBA7P41226 1012 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 CRKP46108 304 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 MYH1P12882 1939 aa11.25□□□□□ -0.61
USP11-201ENST00000218348 SHTN1A0MZ66 631 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 CLRN2A0PK11 232 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 CLSTN1O94985 981 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 SPICE1Q8N0Z3 855 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
USP11-201ENST00000218348 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 RSPH14Q9UHP6 348 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 DDTLA6NHG4 134 aaPredicted RBP11.24□□□□□ -0.61
USP11-201ENST00000218348 RAD17O75943 681 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 GNAQP50148 359 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 MORC3Q14149 939 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
USP11-201ENST00000218348 IQUBQ8NA54 791 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 MTMR14Q8NCE2 650 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 TBCKQ8TEA7 893 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.24□□□□□ -0.61
USP11-201ENST00000218348 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 PCNTO95613 3336 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 TRIM49BA6NDI0 452 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 PDHBP11177 359 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 PTPN14Q15678 1187 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
USP11-201ENST00000218348 FERMT2Q96AC1 680 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 VPS16Q9H269 839 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 MTMR4Q9NYA4 1195 aa11.24□□□□□ -0.61
USP11-201ENST00000218348 FAM237AA0A1B0GTK4 181 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 MARCH6O60337 910 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 CDC25BP30305 580 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 CEP135Q66GS9 1140 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 DESI2Q9BSY9 194 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 YY1AP1Q9H869 796 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 COL2A1P02458 1487 aaPredicted RBP11.23□□□□□ -0.61
USP11-201ENST00000218348 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 IKBKBO14920 756 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 ZYXQ15942 572 aaKnown RBP11.23□□□□□ -0.61
USP11-201ENST00000218348 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
USP11-201ENST00000218348 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
USP11-201ENST00000218348 CCDC66A2RUB6 948 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 TCP10L2B9ZVM9 353 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 TDP2O95551 362 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 EGFRP00533 1210 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 MYRIPQ8NFW9 859 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 TXLNAP40222 546 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 USH1GQ495M9 461 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 SYT10Q6XYQ8 523 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 MLKLQ8NB16 471 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 AGBL3Q8NEM8 1001 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 CCDC148Q8NFR7 591 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L15C9J2P7 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L13C9JLJ4 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L11C9JVI0 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L18D6R9N7 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L22D6RA61 530 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms