RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 FOXP4Q8IVH2 680 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 REXO1Q8N1G1 1221 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 SCAF8Q9UPN6 1271 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 LAMB1P07942 1786 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 KIAA1551Q9HCM1 1747 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 PEX14O75381 377 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 UBA7P41226 1012 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 SLC35G1Q2M3R5 365 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 GALNT17Q6IS24 598 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 KRT25Q7Z3Z0 450 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 APBB1IPQ7Z5R6 666 aaPredicted RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 ZNF579Q8NAF0 562 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 RETREG2Q8NC44 543 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 MNS1Q8NEH6 495 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 KANSL2Q9H9L4 492 aa10.04□□□□□ -0.8
MTHFD1-201ENST00000216605 GH2P01242 217 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 CASP1P29466 404 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 ADCY7P51828 1080 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 DALRD3Q5D0E6 543 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 ADGRF4Q8IZF3 695 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 SPICE1Q8N0Z3 855 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 KRT222Q8N1A0 295 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 ZNF513Q8N8E2 541 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 NRBP1Q9UHY1 535 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 COL11A2P13942 1736 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 USP17L10C9JJH3 530 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 FKBP1AP62942 108 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 ATP2C1P98194 919 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 DHX8Q14562 1220 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 R3HDM1Q15032 1099 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 ZYXQ15942 572 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 GPATCH4Q5T3I0 446 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 MIGA2Q7L4E1 593 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 DHX40Q8IX18 779 aaKnown RBP10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 IQUBQ8NA54 791 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 TNFRSF25Q93038 417 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
MTHFD1-201ENST00000216605 STAT6P42226 847 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 ZNF543Q08ER8 600 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 PTPN14Q15678 1187 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 ZNF397Q8NF99 534 aaPredicted RBP10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 KIF18AQ8NI77 898 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 TBCKQ8TEA7 893 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 UIMC1Q96RL1 719 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 IDI2Q9BXS1 227 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 BLZF1Q9H2G9 400 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 DACH1Q9UI36 760 aa10.02□□□□□ -0.8
MTHFD1-201ENST00000216605 SLFN14P0C7P3 912 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 GUCY2CP25092 1073 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 CDC25BP30305 580 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 SNAP25P60880 206 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 NEK8Q86SG6 692 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 CACTINQ8WUQ7 758 aaKnown RBP10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 MRIQ9BWK5 157 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 IFNKQ9P0W0 207 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 ZNRF3Q9ULT6 936 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 GJA3Q9Y6H8 435 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 MYO3BQ8WXR4 1341 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 KARSQ15046 597 aaKnown RBP10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 UBE2SQ16763 222 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 USH1GQ495M9 461 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 TMEM179Q6ZVK1 233 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 SH3BP5LQ7L8J4 393 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 ZMYND12Q9H0C1 365 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 EHD4Q9H223 541 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 TAOK3Q9H2K8 898 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 DNAJC18Q9H819 358 aa10.02□□□□□ -0.81
MTHFD1-201ENST00000216605 PNMA6FA0A0J9YX94 578 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 TXKP42681 527 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 MYL5Q02045 173 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 RRAGBQ5VZM2 374 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 JMJD4Q9H9V9 463 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 MAN1B1Q9UKM7 699 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 LRRC37AA6NMS7 1700 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 TMEM232C9JQI7 657 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 F5H6K3 240 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 MRPL12P52815 198 aaKnown RBP10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 STX17P56962 302 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 KLRC3Q07444 240 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 TERF2Q15554 542 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 CIAPIN1Q6FI81 312 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 LRRC8AQ8IWT6 810 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 TMEM60Q9H2L4 133 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 RIOX1Q9H6W3 641 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 ZNF70Q9UC06 446 aaPredicted RBP10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 TUBE1Q9UJT0 475 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 ECM29Q5VYK3 1845 aa10.01□□□□□ -0.81
MTHFD1-201ENST00000216605 A0A087X0B3 334 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 UNCXA6NJT0 531 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 PP2D1A8MPX8 630 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 ENTPD3O75355 529 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 TECP42680 631 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 PAGE5Q96GU1 130 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 CDK5RAP3Q96JB5 506 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms