RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 ISM2Q6H9L7 571 aa16.62■□□□□ 0.25
CBX6-201ENST00000216083 EPSTI1Q96J88 318 aa16.62■□□□□ 0.25
CBX6-201ENST00000216083 CAP2P40123 477 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 ANO6Q4KMQ2 910 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 CCDC112Q8NEF3 446 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
CBX6-201ENST00000216083 BIN1O00499 593 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 FOXN1O15353 648 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 CTIFO43310 598 aaKnown RBP16.61■□□□□ 0.25
CBX6-201ENST00000216083 SMARCA1P28370 1054 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 CDC25AP30304 524 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 TNNI2P48788 182 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 LONRF3Q496Y0 759 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 RBM43Q6ZSC3 357 aaKnown RBP16.61■□□□□ 0.25
CBX6-201ENST00000216083 DNAJC25Q9H1X3 360 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 PNMA6FA0A0J9YX94 578 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 TRIM5Q9C035 493 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 KCNH3Q9ULD8 1083 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 HPSEQ9Y251 543 aa16.61■□□□□ 0.25
CBX6-201ENST00000216083 SRPRBQ9Y5M8 271 aaKnown RBP16.61■□□□□ 0.25
CBX6-201ENST00000216083 SMCHD1A6NHR9 2005 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 H7C1D1 291 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 ZBTB5O15062 677 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 HIRAP54198 1017 aaPredicted RBP16.6■□□□□ 0.25
CBX6-201ENST00000216083 CDC37Q16543 378 aaPredicted RBP16.6■□□□□ 0.25
CBX6-201ENST00000216083 IL17AQ16552 155 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 USH1GQ495M9 461 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 CEP131Q9UPN4 1083 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 BMP3P12645 472 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 LETM2Q2VYF4 491 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 FAM83BQ5T0W9 1011 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 DCAF4Q8WV16 495 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
CBX6-201ENST00000216083 POLR2DO15514 142 aaKnown RBP16.59■□□□□ 0.25
CBX6-201ENST00000216083 FEZ1Q99689 392 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 USP27XA6NNY8 438 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 INPP5BP32019 993 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 PRKG1Q13976 671 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 REXO1Q8N1G1 1221 aaKnown RBP16.59■□□□□ 0.25
CBX6-201ENST00000216083 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 IPO4Q8TEX9 1081 aaKnown RBP16.59■□□□□ 0.25
CBX6-201ENST00000216083 UIMC1Q96RL1 719 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 ARHGEF10LQ9HCE6 1279 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 GGA3Q9NZ52 723 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
CBX6-201ENST00000216083 A0A087X0B3 334 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 GNA11P29992 359 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 TERF2Q15554 542 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 GMCL1P1Q8NEA9 526 aa16.59■□□□□ 0.25
CBX6-201ENST00000216083 CCDC12Q8WUD4 166 aaPredicted RBP16.59■□□□□ 0.25
CBX6-201ENST00000216083 ZNF215Q9UL58 517 aaPredicted RBP16.59■□□□□ 0.25
CBX6-201ENST00000216083 USP17L15C9J2P7 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L13C9JLJ4 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L11C9JVI0 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L18D6R9N7 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L22D6RA61 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L17D6RBQ6 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L19D6RCP7 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L20D6RJB6 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L24Q0WX57 530 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 PNOCQ13519 176 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 ELF2Q15723 593 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 C11orf57Q6ZUT1 292 aaPredicted RBP16.58■□□□□ 0.24
CBX6-201ENST00000216083 KIF18AQ8NI77 898 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 TBCKQ8TEA7 893 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 FBXO28Q9NVF7 368 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 TBC1D12O60347 775 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 ADCY7P51828 1080 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 ATP2C1P98194 919 aaPredicted RBP16.58■□□□□ 0.24
CBX6-201ENST00000216083 SYMPKQ92797 1274 aaKnown RBP16.58■□□□□ 0.24
CBX6-201ENST00000216083 TMX2Q9Y320 296 aa16.58■□□□□ 0.24
CBX6-201ENST00000216083 GOLGA6L6A8MZA4 724 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 MTMR8Q96EF0 704 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 ZNF341Q9BYN7 854 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 CCNT1O60563 726 aaKnown RBP16.57■□□□□ 0.24
CBX6-201ENST00000216083 GPC2Q8N158 579 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
CBX6-201ENST00000216083 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 SERTAD1Q9UHV2 236 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 PP2D1A8MPX8 630 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 SYDE2Q5VT97 1194 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 GALNT17Q6IS24 598 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 C4orf32Q8N8J7 132 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 CNNM3Q8NE01 707 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 PRR12Q9ULL5 1215 aa16.57■□□□□ 0.24
CBX6-201ENST00000216083 POLR2AP24928 1970 aaKnown RBP16.56■□□□□ 0.24
CBX6-201ENST00000216083 SBF1O95248 1867 aa16.56■□□□□ 0.24
CBX6-201ENST00000216083 TRAPPC10P48553 1259 aa16.56■□□□□ 0.24
CBX6-201ENST00000216083 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.24
CBX6-201ENST00000216083 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms