RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 CLK2P49760 499 aaKnown RBP18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 UBE2HP62256 183 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 SLC39A14Q15043 492 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 STK38Q15208 465 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 SKOR2Q2VWA4 1001 aaPredicted RBP18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 HOXC10Q9NYD6 342 aa18.24■□□□□ 0.51
SNRPD3-201ENST00000215829 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 GJA5P36382 358 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 PTPAQ15257 358 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 TREML2Q5T2D2 321 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 JAKMIP3Q5VZ66 844 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 GADL1Q6ZQY3 521 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 TEX2Q8IWB9 1127 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 KCNG4Q8TDN1 519 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 ATG4CQ96DT6 458 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 PNMA2Q9UL42 364 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 PCDHB6Q9Y5E3 794 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 LOC285556D6RIA3 1793 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 TRPM7Q96QT4 1865 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 ABCB11O95342 1321 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 MYPNQ86TC9 1320 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
SNRPD3-201ENST00000215829 SPTLC2O15270 562 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 ATP2B1P20020 1258 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 NONOQ15233 471 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 FASTKD5Q7L8L6 764 aaKnown RBP18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 AGBL1Q96MI9 1066 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 TMEM260Q9NX78 707 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 MRPL11Q9Y3B7 192 aaKnown RBP18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 CTDP1Q9Y5B0 961 aaPredicted RBP18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 MEIS2O14770 477 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 OPLAHO14841 1288 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 SNAPC2Q13487 334 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 UBE2SQ16763 222 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 TTC38Q5R3I4 469 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 CCPG1Q9ULG6 757 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 CEP131Q9UPN4 1083 aa18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
SNRPD3-201ENST00000215829 KIF3CO14782 793 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 MOGSQ13724 837 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 INF2Q27J81 1249 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 USP17L6PQ6QN14 398 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 CPXCR1Q8N123 301 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 REPS2Q8NFH8 660 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 WNK4Q96J92 1243 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 PGBD1Q96JS3 809 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 RAVER2Q9HCJ3 691 aaKnown RBP18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 AGTPBP1Q9UPW5 1226 aa18.21■□□□□ 0.51
SNRPD3-201ENST00000215829 PIK3CDO00329 1044 aa18.2■□□□□ 0.5
SNRPD3-201ENST00000215829 PPP6R2O75170 966 aa18.2■□□□□ 0.5
SNRPD3-201ENST00000215829 MBD3O95983 291 aa18.2■□□□□ 0.5
SNRPD3-201ENST00000215829 ME1P48163 572 aa18.2■□□□□ 0.5
SNRPD3-201ENST00000215829 OAZ1P54368 228 aa18.2■□□□□ 0.5
SNRPD3-201ENST00000215829 KLHL40Q2TBA0 621 aa18.2■□□□□ 0.5
SNRPD3-201ENST00000215829 MCTP2Q6DN12 878 aa18.2■□□□□ 0.5
SNRPD3-201ENST00000215829 GOLGA6L4A6NEF3 574 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 WNT7AO00755 349 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 BMP15O95972 392 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 ZNF174Q15697 407 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 JMYQ8N9B5 988 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 TBCKQ8TEA7 893 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 PCDHA7Q9UN72 937 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 MORC2Q9Y6X9 1032 aaPredicted RBP18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 PASKQ96RG2 1323 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 ATP2A1O14983 1001 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 AP3B2Q13367 1082 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 NEK8Q86SG6 692 aa18.19■□□□□ 0.5
SNRPD3-201ENST00000215829 FOSP01100 380 aaPredicted RBP18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 MARCKSP29966 332 aaPredicted RBP18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 GTF2A2P52657 109 aa18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 HUNKP57058 714 aa18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 PABPC4Q13310 644 aaKnown RBP eCLIP18.18■□□□□ 0.51e-10■■■□□ 18.4
SNRPD3-201ENST00000215829 ADALQ6DHV7 355 aa18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 GPAT2Q6NUI2 795 aa18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 ZNF214Q9UL59 606 aaPredicted RBP18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 COL11A1P12107 1806 aaPredicted RBP18.18■□□□□ 0.5
SNRPD3-201ENST00000215829 GCOM1H8Y6P7 765 aaPredicted RBP18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 POLR2MP0CAP2 368 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 ZBTB48P10074 688 aaPredicted RBP18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 CETPP11597 493 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 ALAS1P13196 640 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 IRX3P78415 501 aaPredicted RBP18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 TPRNQ4KMQ1 711 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 SPRYD7Q5W111 196 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 SMC1BQ8NDV3 1235 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 CLEC4DQ8WXI8 215 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 MS4A4AQ96JQ5 239 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 P2RX7Q99572 595 aaKnown RBP18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 CFBP00751 764 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 MCM7P33993 719 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 LBX2Q6XYB7 198 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 MCF2L2Q86YR7 1114 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 MB21D1Q8N884 522 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 TBC1D5Q92609 795 aa18.17■□□□□ 0.5
SNRPD3-201ENST00000215829 ANO3Q9BYT9 981 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms