RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 RASA3Q14644 834 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 TSGA10IPQ3SY00 556 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 TBCKQ8TEA7 893 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 WDHD1O75717 1129 aaPredicted RBP13.48□□□□□ -0.25
CHPF2-201ENST00000035307 ALX1Q15699 326 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 CCDC113Q9H0I3 377 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 LRWD1Q9UFC0 647 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
CHPF2-201ENST00000035307 FOXP2O15409 715 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 SPP2Q13103 211 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 SLC30A10Q6XR72 485 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 RTFDC1Q9BY42 306 aaPredicted RBP13.47□□□□□ -0.25
CHPF2-201ENST00000035307 RNF26Q9BY78 433 aaPredicted RBP13.47□□□□□ -0.25
CHPF2-201ENST00000035307 CNOT7Q9UIV1 285 aaKnown RBP13.47□□□□□ -0.25
CHPF2-201ENST00000035307 TBCAO75347 108 aaKnown RBP13.47□□□□□ -0.25
CHPF2-201ENST00000035307 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
CHPF2-201ENST00000035307 OSBPL5Q9H0X9 879 aaPredicted RBP13.47□□□□□ -0.25
CHPF2-201ENST00000035307 SLC39A2Q9NP94 309 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 GOLGA6L9A6NEM1 432 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 RAPGEF1Q13905 1077 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 DLK2Q6UY11 383 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 SH2D3AQ9BRG2 576 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 A0A1W2PQ27 194 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 A0A1W2PQ64 194 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 F5H6K3 240 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 MEIS1O00470 390 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 CYLC1P35663 651 aaPredicted RBP13.47□□□□□ -0.25
CHPF2-201ENST00000035307 ECE1P42892 770 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 CXCL9Q07325 125 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 KLRC3Q07444 240 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 GADL1Q6ZQY3 521 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 FBXO28Q9NVF7 368 aa13.47□□□□□ -0.25
CHPF2-201ENST00000035307 DDAH1O94760 285 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
CHPF2-201ENST00000035307 KIF5AQ12840 1032 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 CALCRLQ16602 461 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 CABP7Q86V35 215 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 SULF1Q8IWU6 871 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 ERO1AQ96HE7 468 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 EPC1Q9H2F5 836 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 TNIP1Q15025 636 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 KCNF1Q9H3M0 494 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 ZNRF3Q9ULT6 936 aa13.46□□□□□ -0.25
CHPF2-201ENST00000035307 STRIP1Q5VSL9 837 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 SV2BQ7L1I2 683 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 FBXO11Q86XK2 927 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 FMR1NBQ8N0W7 255 aaPredicted RBP13.46□□□□□ -0.26
CHPF2-201ENST00000035307 ACER1Q8TDN7 264 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 WRNIP1Q96S55 665 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 MAN1B1Q9UKM7 699 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 PRDM4Q9UKN5 801 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 TACC3Q9Y6A5 838 aa13.46□□□□□ -0.26
CHPF2-201ENST00000035307 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
CHPF2-201ENST00000035307 ARHGAP6O43182 974 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 CASP14P31944 242 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 HERC4Q5GLZ8 1057 aaPredicted RBP13.45□□□□□ -0.26
CHPF2-201ENST00000035307 CNGA4Q8IV77 575 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 GOLGA1Q92805 767 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 GPR75-ASB3A0A0A6YYF3 556 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 ENC1O14682 589 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 AP5Z1O43299 807 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
CHPF2-201ENST00000035307 BMP3P12645 472 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 LRRC41Q15345 812 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 CDAN1Q8IWY9 1227 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 ZHX2Q9Y6X8 837 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 SF3A3Q12874 501 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHPF2-201ENST00000035307 RDH13Q8NBN7 331 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 VPS18Q9P253 973 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 PPP2R2CQ9Y2T4 447 aa13.45□□□□□ -0.26
CHPF2-201ENST00000035307 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 FGFR1OPO95684 399 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 ANGEL2Q5VTE6 544 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 DGKHQ86XP1 1220 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 FAM114A1Q8IWE2 563 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 PPP1R13BQ96KQ4 1090 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 SPON1Q9HCB6 807 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 GINS2Q9Y248 185 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 BACH1O14867 736 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 TROAPQ12815 778 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 CDC37Q16543 378 aaPredicted RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 SGMS1Q86VZ5 419 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 TPH2Q8IWU9 490 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 FBXO41Q8TF61 875 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 IFT81Q8WYA0 676 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 DPF2Q92785 391 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 CCPG1Q9ULG6 757 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 GDAQ9Y2T3 454 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms