RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SIRT2Q8IXJ6 389 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 ZNF34Q8IZ26 560 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 TAB2Q9NYJ8 693 aa11.46□□□□□ -0.58
NIPAL3-201ENST00000003912 ABCC12Q96J65 1359 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 DTNBO60941 627 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 HSF2BPO75031 334 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 DCUN1D2Q6PH85 259 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 STAG1Q8WVM7 1258 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 SLF1Q9BQI6 1058 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 PODXL2Q9NZ53 605 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 ATP2A2P16615 1042 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 ZNF569Q5MCW4 686 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 ABI1Q8IZP0 508 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 KIAA1524Q8TCG1 905 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 ZNF830Q96NB3 372 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 MTMR6Q9Y217 621 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 AKT3Q9Y243 479 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 UTYO14607 1347 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 IGSF3O75054 1194 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 ABCD1P33897 745 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 TNNC1P63316 161 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 PNOCQ13519 176 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 SLC15A2Q16348 729 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 TBCKQ8TEA7 893 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 IPO4Q8TEX9 1081 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 COA7Q96BR5 231 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 KIAA1024Q9UPX6 916 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 PREX1Q8TCU6 1659 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 FOXO4P98177 505 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 ARMCX5Q6P1M9 558 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 TECPR2O15040 1411 aa11.45□□□□□ -0.58
NIPAL3-201ENST00000003912 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 USP17L10C9JJH3 530 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 FERP16591 822 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 PPP1R7Q15435 360 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 FAM26FQ5R3K3 315 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 TRIML1Q8N9V2 468 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 TBC1D16Q8TBP0 767 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 METTL14Q9HCE5 456 aaKnown RBP11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 SPATA31D1Q6ZQQ2 1576 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 A0A1W2PRG0 241 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 SNAP23O00161 211 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 TMEM191BP0C7N4 346 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 RNF207Q6ZRF8 634 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 JAKMIP2Q96AA8 810 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 FAM84BQ96KN1 310 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 NACC1Q96RE7 527 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 HAUS2Q9NVX0 235 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 TXNDC16Q9P2K2 825 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 MYO3AQ8NEV4 1616 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 NOLC1Q14978 699 aaKnown RBP eCLIP11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 ZNF710Q8N1W2 664 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 UBL4BQ8N7F7 174 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 CCDC114Q96M63 670 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 ARMCX3Q9UH62 379 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 KLHL30Q0D2K2 578 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 ODR4Q5SWX8 454 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 RNF216Q9NWF9 866 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-201ENST00000003912 STK10O94804 968 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 PSAPP07602 524 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 GAP43P17677 238 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 SFMBT2Q5VUG0 894 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 CCDC125Q86Z20 511 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 PPP1R9BQ96SB3 815 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 RIOK1Q9BRS2 568 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 HERC5Q9UII4 1024 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 CALCOCO2Q13137 446 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 NSUN7Q8NE18 718 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 INCENPQ9NQS7 918 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 C1orf112Q9NSG2 853 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 CTTNBP2NLQ9P2B4 639 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 MTRF1LQ9UGC7 380 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 HOXD10P28358 340 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 MED10Q9BTT4 135 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 STMN4Q9H169 189 aaPredicted RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 LRFN2Q9ULH4 789 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 RIPOR2Q9Y4F9 1068 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 FAM169AQ9Y6X4 670 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 RFX7Q2KHR2 1363 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 KRBA2Q6ZNG9 492 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 DCP1AQ9NPI6 582 aaPredicted RBP11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 KIAA1468Q9P260 1216 aa11.43□□□□□ -0.58
NIPAL3-201ENST00000003912 AP3B2Q13367 1082 aa11.42□□□□□ -0.58
NIPAL3-201ENST00000003912 TMTC1Q8IUR5 882 aa11.42□□□□□ -0.58
NIPAL3-201ENST00000003912 NSMCE1Q8WV22 266 aa11.42□□□□□ -0.58
NIPAL3-201ENST00000003912 LARP4BQ92615 738 aaKnown RBP11.42□□□□□ -0.58
NIPAL3-201ENST00000003912 FAM204AQ9H8W3 233 aa11.42□□□□□ -0.58
NIPAL3-201ENST00000003912 PPP6R2O75170 966 aa11.42□□□□□ -0.58
NIPAL3-201ENST00000003912 MMP1P03956 469 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms