RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Fndc3bQ6NWW9 1207 aaKnown RBP25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 BcrQ6PAJ1 1270 aa25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Nat10Q8K224 1024 aaKnown RBP25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Arhgef25Q9CWR0 618 aa25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 SerhlQ9EPB5 311 aa25.76■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Igsf9bE9PZ19 1328 aa25.75■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Sycp2lA0A0M3U1B0 842 aa25.75■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Ankrd35E9Q9D8 996 aa25.75■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Fam89aQ14BJ1 175 aa25.75■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Brd2Q7JJ13 798 aaKnown RBP25.75■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Atp5c1Q91VR2 298 aaKnown RBP25.75■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Cd2apQ9JLQ0 637 aa25.75■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Pfkfb1P70266 471 aa25.74■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Adam39Q7M762 756 aa25.74■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Zfp202Q8C879 641 aa25.74■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Hexim1Q8R409 356 aaKnown RBP25.74■■□□□ 1.71
Scn1b-201ENSMUST00000098548 PdhbQ9D051 359 aa25.74■■□□□ 1.71
Scn1b-201ENSMUST00000098548 PatjQ63ZW7 1834 aa25.74■■□□□ 1.71
Scn1b-201ENSMUST00000098548 A0A1L1SQF0 893 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Pabpc1lA2A5N3 607 aaKnown RBP25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Tpm3-rs7D3Z2H9 248 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Dapk3O54784 448 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 MarcksP26645 309 aaKnown RBP25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Hoxc10P31257 342 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Gdf10P97737 476 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Atp11aP98197 1187 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Cyp7b1Q60991 507 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Recql4Q75NR7 1216 aaKnown RBP25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 PhipQ8VDD9 1821 aaKnown RBP25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Ripor3A1L3T7 938 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 CebpaP53566 359 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Rgl2Q61193 778 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Pcdhb14Q6PB90 796 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Fbxo10Q7TQF2 950 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Serpinb13Q8CDC0 389 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Ttc8Q8VD72 515 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Azi2Q9QYP6 405 aa25.73■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Pramel3A2AHA7 463 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Gm7903A2AWL1 463 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 AV320801A2AWL3 467 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Gm15023L7MUB4 467 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 MthfslL7N466 203 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 EzrP26040 586 aaKnown RBP25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Evi5P97366 809 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Slc16a10Q3U9N9 512 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Mars2Q499X9 586 aaKnown RBP25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Prpf4bQ61136 1007 aaKnown RBP25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Tas2r124Q7M718 309 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Sap130Q8BIH0 1057 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Ndufb9Q9CQJ8 179 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Ubxn8Q9QZ49 277 aa25.72■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Dhx8A2A4P0 1244 aaKnown RBP25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Gm21969J3QJZ1 289 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Cavin1O54724 392 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 PparaP23204 468 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Gcnt1Q09324 428 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Fbxo11Q7TPD1 930 aaKnown RBP25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Galntl5Q9D4M9 431 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Etnk1Q9D4V0 363 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Ubiad1Q9DC60 336 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Stxbp4Q9WV89 557 aa25.71■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Gm15448F6PZL4 682 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Cyp2b10P12791 500 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Gna11P21278 359 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 SelpQ01102 768 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Cyp2e1Q05421 493 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Cyp4x1Q6A152 507 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Usp17leQ7M764 540 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Supt20hQ7TT00 530 aaKnown RBP25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Dnaaf2Q8BPI1 814 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Vps53Q8CCB4 832 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Ankrd1Q9CR42 319 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Elp3Q9CZX0 547 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Tmem191cQ9JJB1 302 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Fndc3c1Q6DFV6 1356 aa25.7■■□□□ 1.71
Scn1b-201ENSMUST00000098548 Irf5P56477 497 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Plekha7Q3UIL6 1118 aaKnown RBP25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Slc45a1Q8BIV7 751 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Senp7Q8BUH8 1037 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 LRWD1Q8BUI3 648 aaKnown RBP25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Slc5a5Q99PN0 618 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Nudt12Q9DCN1 462 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Tmod4Q9JLH8 345 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Rnf216P58283 853 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Siah1bQ06985 282 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 PRAG1Q571I4 1179 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Polr3gQ6NXY9 223 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Kctd3Q8BFX3 815 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Adgra1Q8C4G9 578 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 DaglbQ91WC9 669 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Iqca1Q9CUL5 857 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Kcnh3Q9WVJ0 1095 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Sel1lQ9Z2G6 790 aa25.69■■□□□ 1.7
Scn1b-201ENSMUST00000098548 CatspereP0DP43 985 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Kiaa1468Q148V7 1216 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 DnerQ8JZM4 737 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Hs2st1Q8R3H7 356 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 IrgqQ8VIM9 583 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Hps3Q91VB4 1002 aa25.68■■□□□ 1.7
Scn1b-201ENSMUST00000098548 Mrpl11Q9CQF0 192 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms