RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Cpb1B2RS76 415 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Lrrc32G3XA59 663 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 EporP14753 507 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Cst8P32766 142 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Grin1P35438 938 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Yy1Q00899 414 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Nlrx1Q3TL44 975 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Xxylt1Q3U4G3 392 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Slc12a8Q8VI23 705 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ubiad1Q9DC60 336 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Btbd19S4R1I0 287 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Scn10aQ6QIY3 1958 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Mcm3P25206 812 aaKnown RBP11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Siah1bQ06985 282 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gm10392Q3V3I3 114 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 PRAG1Q571I4 1179 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Znf618Q80YY7 953 aaKnown RBP11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Osbpl2Q8BX94 484 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Lca5lQ8C0X0 741 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Pcdh15Q99PJ1 1943 aa11.29□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Usp31E9Q6Y8 1344 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ccdc172Q810N9 267 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Wdr24Q8CFJ9 790 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gprc5cQ8K3J9 440 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Rhobtb2Q91V93 728 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ifi202Q9R002 445 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tspoap1Q7TNF8 1846 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Ccdc88cQ6VGS5 2009 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Fyb2A2A995 729 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Pcif1P59114 706 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 GabpaQ00422 454 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Krt23Q99PS0 422 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Rnf181Q9CY62 165 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gm43738A0A0G2JEA5 862 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gm38392E9Q2A2 434 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gm4758L7N258 96 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Rps6P62754 249 aaKnown RBP11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Meis2P97367 477 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Gtf3c5Q8R2T8 520 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Bub1bQ9Z1S0 1052 aa11.28□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Igfbp4P47879 254 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 DSCC1Q14AI0 399 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Spryd7Q3TFQ1 196 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Sh2d1b2Q45HK4 132 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Nlrp2Q4PLS0 1046 aaKnown RBP11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Slain1Q68FF7 579 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Vps53Q8CCB4 832 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 DnerQ8JZM4 737 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Yeats4Q9CR11 227 aaKnown RBP11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Sertad1Q9JL10 236 aa11.27□□□□□ -0.6
Ccdc38-201ENSMUST00000092215 Tas2r124Q7M718 309 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Q8K2W9 541 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ep400Q8CHI8 3072 aaKnown RBP11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Btn2a2A4QPC6 514 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Zscan29E9Q5B4 869 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Kif3aP28741 701 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Cdh15P33146 784 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Pex1Q5BL07 1284 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Gba2Q69ZF3 918 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 GlmnQ8BZM1 596 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Lrrd1Q8C0R9 853 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 CnstQ8CBC4 711 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 E4f1Q8CCE9 783 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 PpatQ8CIH9 517 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 NapaQ9DB05 295 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Fem1bQ9Z2G0 627 aa11.27□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ccdc78D3Z5T1 437 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Usp49Q6P9L4 685 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Supt20hQ7TT00 530 aaKnown RBP11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Hook1Q8BIL5 728 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 GlyctkQ8QZY2 523 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Hexim1Q8R409 356 aaKnown RBP11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Snap47Q8R570 413 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 NenfQ9CQ45 171 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Q9DAQ4 598 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Syce3B5KM66 88 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Cyp2b10P12791 500 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Nr5a1P33242 462 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Brd9Q3UQU0 596 aaKnown RBP11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Krt87Q6IMF0 495 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Csrnp2Q8BGQ2 534 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Nxf1Q99JX7 618 aaKnown RBP11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 SerhlQ9EPB5 311 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ulk4Q3V129 1303 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Trpm7Q923J1 1863 aa11.26□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 1700113H08RikE9Q9Q5 327 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Nf2P46662 596 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Cfap52Q5F201 620 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ctdspl2Q8BG15 465 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Haus7Q8BKT8 364 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Cep85Q8BMK0 761 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mettl16Q9CQG2 553 aaKnown RBP11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 AdnpQ9Z103 1108 aaKnown RBP11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Zbtb12Q9Z150 459 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Zdbf2Q5SS00 2493 aaKnown RBP11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mctp1E9PV86 951 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Dapk3O54784 448 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Magea8O89012 320 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Hsp90aa1P07901 733 aaKnown RBP11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Kif4P33174 1231 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms