RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 CnstQ8CBC4 711 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ddx41Q91VN6 622 aaKnown RBP11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Usp11Q99K46 921 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 CaluO35887 315 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pik3caP42337 1068 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nab2Q61127 525 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pcdhb14Q6PB90 796 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Kctd6Q8BNL5 237 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Tut1Q8R3F9 869 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Serpinb3bQ9D1Q5 387 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Capn12Q9ER56 720 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Mroh9G5E8L9 891 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ranbp1P34022 203 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pim2Q62070 370 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nek9Q8K1R7 984 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Sec63Q8VHE0 760 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Mrpl11Q9CQF0 192 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Parp2O88554 559 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Idh1O88844 414 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Slc7a1Q09143 622 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Bola2Q8BGS2 86 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Erp44Q9D1Q6 406 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Efcc1Q9JJF6 558 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Slfn1Q9Z0I7 337 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pex11aQ9Z211 246 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 MeiocA2AG06 965 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Card6E9PWH2 1175 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Atp8b1Q148W0 1251 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Swap70Q6A028 585 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Lonp1Q8CGK3 949 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cdk8Q8R3L8 464 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nxf1Q99JX7 618 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Rwdd2aQ9D9S3 292 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cib2Q9Z309 187 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Sorbs1Q62417 1290 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Slx1bQ8BX32 270 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Podxl2Q8CAE9 603 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Tbx22Q8K402 517 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Akap8Q9DBR0 687 aaKnown RBP11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Foxo4Q9WVH3 505 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Mtmr2Q9Z2D1 643 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cps1Q8C196 1500 aa11.31□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Apol11aE9PZG0 334 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ccng2O08918 344 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 AdkP55264 361 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Smarcad1Q04692 1021 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nxf2Q4ZGD8 691 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Rsad1Q5SUV1 442 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cdc37Q61081 379 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 GypcQ78HU7 95 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ankrd13aQ80UP5 588 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Smim5Q8BT42 78 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Eno4Q8C042 619 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cog5Q8C0L8 829 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Atp2a1Q8R429 994 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Rbm42Q91V81 474 aaKnown RBP11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Mfap3lQ9D3X9 409 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pus7B7ZNL8 666 aaKnown RBP11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Lrrc32G3XA59 663 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 MaeaQ4VC33 396 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Glra4Q61603 456 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cyp26b1Q811W2 512 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ccdc87Q8CDL9 855 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pcdhb2Q91Y00 799 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Vstm4T1NXB5 319 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pdcd11Q6NS46 1862 aaKnown RBP11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ncf2O70145 525 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pde4aO89084 844 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Calb1P12658 261 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nsrp1Q5NCR9 542 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Slc9a1Q61165 820 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ncoa7Q6DFV7 943 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Rab3il1Q8VDV3 383 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gucy1b3O54865 620 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gna15P30678 374 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cct5P80316 541 aaKnown RBP11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Kiaa1328Q6NZK5 612 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Haus4Q8BFT2 363 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nrbp2Q91V36 499 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 MesdQ9ERE7 224 aa11.3□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Enc1O35709 589 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Spata24Q6P926 205 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Tmem132dQ76HP3 1097 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 D130040H23RikQ8BII3 405 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Spata16Q8C636 571 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Fam161bQ8CB59 589 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Trim60Q8VI40 466 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ccdc152E9PX14 254 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cyp19a1P28649 503 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nr2f2P43135 414 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Surf6P70279 355 aaKnown RBP11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Xpo5Q924C1 1204 aaKnown RBP11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 DeptorQ570Y9 409 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gngt1Q61012 74 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 EsrrbQ61539 433 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Vat1lQ80TB8 417 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Golga1Q9CW79 758 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Creld2Q9CYA0 350 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Glt1d1A4FUP9 346 aa11.29□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pagr1bF6V0H0 108 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 116.1 ms