RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 QRICH1Q2TAL8 776 aa14.25□□□□□ -0.13
LINC00339-213ENST00000642137 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-213ENST00000642137 REPS2Q8NFH8 660 aa14.25□□□□□ -0.13
LINC00339-213ENST00000642137 WASF1Q92558 559 aa14.25□□□□□ -0.13
LINC00339-213ENST00000642137 PARK7Q99497 189 aaKnown RBP14.25□□□□□ -0.13
LINC00339-213ENST00000642137 ORC3Q9UBD5 711 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-213ENST00000642137 SEC63Q9UGP8 760 aaKnown RBP14.25□□□□□ -0.13
LINC00339-213ENST00000642137 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
LINC00339-213ENST00000642137 RABGAP1Q9Y3P9 1069 aa14.25□□□□□ -0.13
LINC00339-213ENST00000642137 CTDP1Q9Y5B0 961 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-213ENST00000642137 hCG_1984214I3L0E3 225 aa14.24□□□□□ -0.13
LINC00339-213ENST00000642137 JAK2O60674 1132 aa14.24□□□□□ -0.13
LINC00339-213ENST00000642137 CYP2C8P10632 490 aa14.24□□□□□ -0.13
LINC00339-213ENST00000642137 CDC37Q16543 378 aaPredicted RBP14.24□□□□□ -0.13
LINC00339-213ENST00000642137 PFKFB3Q16875 520 aaPredicted RBP14.24□□□□□ -0.13
LINC00339-213ENST00000642137 HOMER1Q86YM7 354 aa14.24□□□□□ -0.13
LINC00339-213ENST00000642137 ZNF713Q8N859 430 aaPredicted RBP14.24□□□□□ -0.13
LINC00339-213ENST00000642137 AMNQ9BXJ7 453 aa14.24□□□□□ -0.13
LINC00339-213ENST00000642137 ZFYVE28Q9HCC9 887 aa14.24□□□□□ -0.13
LINC00339-213ENST00000642137 RBPJLQ9UBG7 517 aa14.24□□□□□ -0.13
LINC00339-213ENST00000642137 ZNF536O15090 1300 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 CA12O43570 354 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 ICAM1P05362 532 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
LINC00339-213ENST00000642137 SCG2P13521 617 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 GJB2P29033 226 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 SNAP25P60880 206 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 TMEM132BQ14DG7 1078 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 TAF1CQ15572 869 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-213ENST00000642137 POTEEQ6S8J3 1075 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 FBXO11Q86XK2 927 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-213ENST00000642137 FAM184AQ8NB25 1140 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-213ENST00000642137 PIBF1Q8WXW3 757 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 DDX11Q96FC9 970 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
LINC00339-213ENST00000642137 KIF3AQ9Y496 699 aa14.23□□□□□ -0.13
LINC00339-213ENST00000642137 COL11A1P12107 1806 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-213ENST00000642137 hCG_1642624A0A1W2PR95 340 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 TLR2O60603 784 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 CNMDO75829 334 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 STAT3P40763 770 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 CCDC174Q6PII3 467 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 RGS22Q8NE09 1264 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 CFHR5Q9BXR6 569 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 RAVER2Q9HCJ3 691 aaKnown RBP14.22□□□□□ -0.13
LINC00339-213ENST00000642137 SH3GLB2Q9NR46 395 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 BTBD7Q9P203 1132 aa14.22□□□□□ -0.13
LINC00339-213ENST00000642137 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-213ENST00000642137 PPP1R11O60927 126 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-213ENST00000642137 DTNBO60941 627 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 XBP1P17861 261 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 Q3C1V9 767 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 TKFCQ3LXA3 575 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 CPXCR1Q8N123 301 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 DNAJC5GQ8N7S2 189 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 COA7Q96BR5 231 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 AGBL1Q96MI9 1066 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 IPO9Q96P70 1041 aaKnown RBP14.21□□□□□ -0.13
LINC00339-213ENST00000642137 ALG1Q9BT22 464 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 BARHL2Q9NY43 387 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 MORF4L1Q9UBU8 362 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 ZNF214Q9UL59 606 aaPredicted RBP14.21□□□□□ -0.13
LINC00339-213ENST00000642137 PCDHA1Q9Y5I3 950 aa14.21□□□□□ -0.13
LINC00339-213ENST00000642137 ABCB11O95342 1321 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 SLC25A27O95847 323 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 PDIA4P13667 645 aaKnown RBP14.2□□□□□ -0.14
LINC00339-213ENST00000642137 COPB2P35606 906 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 SLC4A3P48751 1232 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 ERVK-9P63128 1117 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 ERVK-24P63145 666 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 C17orf99Q6UX52 265 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 RIOX2Q8IUF8 465 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 CCDC12Q8WUD4 166 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-213ENST00000642137 PAGR1Q9BTK6 254 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 TEX13BQ9BXU2 312 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 MAF1Q9H063 256 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 SPATC1LQ9H0A9 340 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 TXNRD2Q9NNW7 524 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 RNF186Q9NXI6 227 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 CCPG1Q9ULG6 757 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 MRPL11Q9Y3B7 192 aaKnown RBP14.2□□□□□ -0.14
LINC00339-213ENST00000642137 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
LINC00339-213ENST00000642137 A0A0G2JMZ2 1700 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 STXBP3O00186 592 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 BCRP11274 1271 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 PDCP20941 246 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 CCNA1P78396 465 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
LINC00339-213ENST00000642137 CRHR2Q13324 411 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 PLS1Q14651 629 aa14.19□□□□□ -0.14
LINC00339-213ENST00000642137 FAM110CQ1W6H9 321 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms