RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 SOGA3Q5TF21 947 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 JAKMIP3Q5VZ66 844 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 ZFPM1Q8IX07 1006 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 TC2NQ8N9U0 490 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 COA7Q96BR5 231 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 ARID3AQ99856 593 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 MAPK8IP1Q9UQF2 711 aa19.18■□□□□ 0.66
PHGDH-229ENST00000641891 PLSCR1O15162 318 aa19.17■□□□□ 0.66
PHGDH-229ENST00000641891 SMARCA1P28370 1054 aa19.17■□□□□ 0.66
PHGDH-229ENST00000641891 GNA11P29992 359 aa19.17■□□□□ 0.66
PHGDH-229ENST00000641891 CACNB3P54284 484 aa19.17■□□□□ 0.66
PHGDH-229ENST00000641891 TBCKQ8TEA7 893 aa19.17■□□□□ 0.66
PHGDH-229ENST00000641891 TEKT1Q969V4 418 aa19.17■□□□□ 0.66
PHGDH-229ENST00000641891 ZNF219Q9P2Y4 722 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-229ENST00000641891 OR52Z1P0C646 297 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 UBA7P41226 1012 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 SYT10Q6XYQ8 523 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-229ENST00000641891 ADD3Q9UEY8 706 aaKnown RBP19.16■□□□□ 0.66
PHGDH-229ENST00000641891 PRPHP41219 470 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 CRKP46108 304 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 ZNF658Q5TYW1 1059 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-229ENST00000641891 NEK8Q86SG6 692 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 KIF18AQ8NI77 898 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 NELFBQ8WX92 580 aa19.16■□□□□ 0.66
PHGDH-229ENST00000641891 LAD1O00515 517 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 MPHOSPH10O00566 681 aaKnown RBP19.15■□□□□ 0.66
PHGDH-229ENST00000641891 TTLL1O95922 423 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 SNHG28P0DPA3 235 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 NCBP1Q09161 790 aaKnown RBP19.15■□□□□ 0.66
PHGDH-229ENST00000641891 ASPRV1Q53RT3 343 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 TTBK2Q6IQ55 1244 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 KIAA0825Q8IV33 1275 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 REXO1Q8N1G1 1221 aaKnown RBP19.15■□□□□ 0.66
PHGDH-229ENST00000641891 BAG1Q99933 345 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-229ENST00000641891 CCSER1Q9C0I3 900 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 FAM196BA6NMK8 535 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 CCT6AP40227 531 aaKnown RBP19.15■□□□□ 0.66
PHGDH-229ENST00000641891 PRCPP42785 496 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 ATP2B2Q01814 1243 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 PAK1Q13153 545 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 SHROOM1Q2M3G4 852 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-229ENST00000641891 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 C2CD5Q86YS7 1000 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 MAP7D2Q96T17 732 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 TMX4Q9H1E5 349 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-229ENST00000641891 SWAP70Q9UH65 585 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 RWDD2AQ9UIY3 292 aa19.15■□□□□ 0.66
PHGDH-229ENST00000641891 PLCG1P19174 1290 aa19.14■□□□□ 0.65
PHGDH-229ENST00000641891 TCP10Q12799 353 aa19.14■□□□□ 0.65
PHGDH-229ENST00000641891 CABP7Q86V35 215 aa19.14■□□□□ 0.65
PHGDH-229ENST00000641891 REXO1L1PQ8IX06 675 aa19.14■□□□□ 0.65
PHGDH-229ENST00000641891 ANKRD7Q92527 254 aa19.14■□□□□ 0.65
PHGDH-229ENST00000641891 RMND1Q9NWS8 449 aa19.14■□□□□ 0.65
PHGDH-229ENST00000641891 PPP1R11O60927 126 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-229ENST00000641891 PBX1P40424 430 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 TECP42680 631 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 ZNF543Q08ER8 600 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 KMT5BQ4FZB7 885 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 DNAJC18Q9H819 358 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 ESYT2A0FGR8 921 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 KIF2AO00139 706 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-229ENST00000641891 ARHGAP6O43182 974 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 KLRC4O43908 158 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 SLC16A2P36021 539 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 KRT31Q15323 416 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 TOGARAM2Q6ZUX3 1019 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 ADGRF4Q8IZF3 695 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 JMJD4Q9H9V9 463 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 KBTBD4Q9NVX7 518 aa19.13■□□□□ 0.65
PHGDH-229ENST00000641891 SCN9AQ15858 1988 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 TRIM49BA6NDI0 452 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 EDIL3O43854 480 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 HLA-DOAP06340 250 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 ADCY7P51828 1080 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 RBL2Q08999 1139 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 KCTD1Q719H9 257 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 IGSF22Q8N9C0 903 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 CPLX3Q8WVH0 158 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 ZNF215Q9UL58 517 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-229ENST00000641891 GREB1LQ9C091 1923 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-229ENST00000641891 SIPA1L1O43166 1804 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 CCDC96Q2M329 555 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 ZDHHC15Q96MV8 337 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 PPP2R2CQ9Y2T4 447 aa19.12■□□□□ 0.65
PHGDH-229ENST00000641891 SLX4Q8IY92 1834 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 MYO3BQ8WXR4 1341 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 MYH4Q9Y623 1939 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 SLC37A4O43826 429 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 HMGB2P26583 209 aaKnown RBP19.11■□□□□ 0.65
PHGDH-229ENST00000641891 CHRNA5P30532 468 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 PMS1P54277 932 aaKnown RBP19.11■□□□□ 0.65
PHGDH-229ENST00000641891 UBE2SQ16763 222 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 PODNQ7Z5L7 613 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 MTERF4Q7Z6M4 381 aaKnown RBP19.11■□□□□ 0.65
PHGDH-229ENST00000641891 CREBRFQ8IUR6 639 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 FLAD1Q8NFF5 587 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 CTAGE1Q96RT6 745 aa19.11■□□□□ 0.65
PHGDH-229ENST00000641891 MMTAG2Q9BU76 263 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms