RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 FHOD1Q9Y613 1164 aa8.03□□□□□ -1.12
CCDC7-216ENST00000640058 SLC12A7Q9Y666 1083 aa8.03□□□□□ -1.12
CCDC7-216ENST00000640058 TAF6LQ9Y6J9 622 aa8.03□□□□□ -1.12
CCDC7-216ENST00000640058 MYOCOSA0A1B0GUC4 107 aa8.02□□□□□ -1.13
CCDC7-216ENST00000640058 ERCC5P28715 1186 aaPredicted RBP8.02□□□□□ -1.13
CCDC7-216ENST00000640058 TCEAL1Q15170 157 aa8.02□□□□□ -1.13
CCDC7-216ENST00000640058 ATG14Q6ZNE5 492 aa8.02□□□□□ -1.13
CCDC7-216ENST00000640058 FAM169BQ8N8A8 192 aa8.02□□□□□ -1.13
CCDC7-216ENST00000640058 ANAPC16Q96DE5 110 aa8.02□□□□□ -1.13
CCDC7-216ENST00000640058 FGD4Q96M96 766 aa8.02□□□□□ -1.13
CCDC7-216ENST00000640058 TCAF2A6NFQ2 919 aa8.01□□□□□ -1.13
CCDC7-216ENST00000640058 CD3EP07766 207 aa8.01□□□□□ -1.13
CCDC7-216ENST00000640058 ENDOUP21128 410 aaKnown RBP8.01□□□□□ -1.13
CCDC7-216ENST00000640058 CEBPAP49715 358 aaPredicted RBP8.01□□□□□ -1.13
CCDC7-216ENST00000640058 SLC7A5Q01650 507 aa8.01□□□□□ -1.13
CCDC7-216ENST00000640058 TMEM52Q8NDY8 209 aa8.01□□□□□ -1.13
CCDC7-216ENST00000640058 PHAXQ9H814 394 aaKnown RBP8.01□□□□□ -1.13
CCDC7-216ENST00000640058 OR14I1A6ND48 311 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 NPIPB6E9PJ23 425 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 EPHX1P07099 455 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 IFNGR1P15260 489 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 HEATR6Q6AI08 1181 aaKnown RBP8□□□□□ -1.13
CCDC7-216ENST00000640058 TMEM132EQ6IEE7 984 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 GALNT18Q6P9A2 607 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 ADAT2Q7Z6V5 191 aaKnown RBP8□□□□□ -1.13
CCDC7-216ENST00000640058 SLCO6A1Q86UG4 719 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 ANKLE2Q86XL3 938 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 C19orf47Q8N9M1 422 aaKnown RBP8□□□□□ -1.13
CCDC7-216ENST00000640058 NUP43Q8NFH3 380 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 KLHL6Q8WZ60 621 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 SEC16BQ96JE7 1060 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 JMJD8Q96S16 334 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 SGPP1Q9BX95 441 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 ZNF552Q9H707 407 aaPredicted RBP8□□□□□ -1.13
CCDC7-216ENST00000640058 CRTAC1Q9NQ79 661 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 IMPACTQ9P2X3 320 aa8□□□□□ -1.13
CCDC7-216ENST00000640058 SF3B6Q9Y3B4 125 aaKnown RBP8□□□□□ -1.13
CCDC7-216ENST00000640058 WTIPA6NIX2 430 aaPredicted RBP7.99□□□□□ -1.13
CCDC7-216ENST00000640058 PRKCAP17252 672 aa7.99□□□□□ -1.13
CCDC7-216ENST00000640058 CILP2Q8IUL8 1156 aa7.99□□□□□ -1.13
CCDC7-216ENST00000640058 TOX2Q96NM4 488 aa7.99□□□□□ -1.13
CCDC7-216ENST00000640058 KLHL25Q9H0H3 589 aa7.99□□□□□ -1.13
CCDC7-216ENST00000640058 CAPN10Q9HC96 672 aa7.99□□□□□ -1.13
CCDC7-216ENST00000640058 WHRNQ9P202 907 aa7.99□□□□□ -1.13
CCDC7-216ENST00000640058 TCF3P15923 654 aa7.98□□□□□ -1.13
CCDC7-216ENST00000640058 PNLIPP16233 465 aa7.98□□□□□ -1.13
CCDC7-216ENST00000640058 CFPP27918 469 aa7.98□□□□□ -1.13
CCDC7-216ENST00000640058 KIAA1211LQ6NV74 962 aa7.98□□□□□ -1.13
CCDC7-216ENST00000640058 VHLLQ6RSH7 139 aa7.98□□□□□ -1.13
CCDC7-216ENST00000640058 LRRC56Q8IYG6 542 aaPredicted RBP7.98□□□□□ -1.13
CCDC7-216ENST00000640058 FCRL3Q96P31 734 aaPredicted RBP7.98□□□□□ -1.13
CCDC7-216ENST00000640058 GBP3Q9H0R5 595 aa7.98□□□□□ -1.13
CCDC7-216ENST00000640058 SMG5Q9UPR3 1016 aaKnown RBP7.98□□□□□ -1.13
CCDC7-216ENST00000640058 MRVI1Q9Y6F6 885 aa7.98□□□□□ -1.13
CCDC7-216ENST00000640058 A0A1W2PQ45 241 aaPredicted RBP7.97□□□□□ -1.13
CCDC7-216ENST00000640058 A0A1W2PQY0 241 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 VAMP4O75379 141 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 MED14OSP0DP75 135 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 ATF4P18848 351 aaPredicted RBP7.97□□□□□ -1.13
CCDC7-216ENST00000640058 GLDCP23378 1020 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 NOP2P46087 812 aaKnown RBP7.97□□□□□ -1.13
CCDC7-216ENST00000640058 RBM25P49756 843 aaKnown RBP7.97□□□□□ -1.13
CCDC7-216ENST00000640058 POU4F1Q01851 419 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 KCNA10Q16322 511 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 DPY19L1Q2PZI1 675 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 CD320Q9NPF0 282 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 STRIP2Q9ULQ0 834 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 SUGT1Q9Y2Z0 365 aa7.97□□□□□ -1.13
CCDC7-216ENST00000640058 A0A1W2PQ27 194 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 A0A1W2PQ64 194 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 A0A1W2PQC6 194 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 A0A1W2PQD8 194 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 STXBP3O00186 592 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 FGF10O15520 208 aaPredicted RBP7.96□□□□□ -1.14
CCDC7-216ENST00000640058 PEX10O60683 326 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 DLG4P78352 724 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 SRSF3P84103 164 aaKnown RBP7.96□□□□□ -1.14
CCDC7-216ENST00000640058 CYP4F8P98187 520 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 JAMLQ86YT9 394 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 MCMBPQ9BTE3 642 aa7.96□□□□□ -1.14
CCDC7-216ENST00000640058 DIS3Q9Y2L1 958 aaKnown RBP7.96□□□□□ -1.14
CCDC7-216ENST00000640058 A0A087WZG4 1122 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 TEX51A0A1B0GUA7 166 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 NUDT19A8MXV4 375 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 SSBP05455 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCDC7-216ENST00000640058 MSL3P1P0C860 447 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 ARL4AP40617 200 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 CASP7P55210 303 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 HLA-DQA1Q5Y7H0 255 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 C1QL4Q86Z23 238 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 CGGBP1Q9UFW8 167 aaPredicted RBP7.95□□□□□ -1.14
CCDC7-216ENST00000640058 ACSL6Q9UKU0 697 aa7.95□□□□□ -1.14
CCDC7-216ENST00000640058 SMAD7O15105 426 aaKnown RBP7.94□□□□□ -1.14
CCDC7-216ENST00000640058 SEMA7AO75326 666 aa7.94□□□□□ -1.14
CCDC7-216ENST00000640058 PPM1BO75688 479 aa7.94□□□□□ -1.14
CCDC7-216ENST00000640058 VIPR1P32241 457 aa7.94□□□□□ -1.14
CCDC7-216ENST00000640058 LINC00310P59036 64 aa7.94□□□□□ -1.14
CCDC7-216ENST00000640058 MVKQ03426 396 aa7.94□□□□□ -1.14
CCDC7-216ENST00000640058 LAPTM5Q13571 262 aa7.94□□□□□ -1.14
CCDC7-216ENST00000640058 RAB3GAP1Q15042 981 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms