RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 GNAQP50148 359 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 CCDC144BQ3MJ40 725 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 ASPRV1Q53RT3 343 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 CLSTN2Q9H4D0 955 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 SNCAIPQ9Y6H5 919 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 ZHX2Q9Y6X8 837 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 H3BQV1 296 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 PRPF3O43395 683 aaKnown RBP10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 DEXIO95424 95 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 SPP2Q13103 211 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 SYCP1Q15431 976 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 HOMER1Q86YM7 354 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 CACTINQ8WUQ7 758 aaKnown RBP10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 SPATA32Q96LK8 384 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 DNAJC25Q9H1X3 360 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 VCPKMTQ9H867 229 aa10.53□□□□□ -0.72
HNRNPU-218ENST00000639064 TRIM75PA6NK02 468 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 IREB2P48200 963 aaKnown RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 MTMR2Q13614 643 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 NOL9Q5SY16 702 aaKnown RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 DCAF4Q8WV16 495 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 LEO1Q8WVC0 666 aaPredicted RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 GMCL1Q96IK5 515 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 GINM1Q9NU53 330 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 DDX19AQ9NUU7 478 aaKnown RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 OTOFQ9HC10 1997 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 GOLGA6L4A6NEF3 574 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 NR1I2O75469 434 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 BMP3P12645 472 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 TPD52L1Q16890 204 aaPredicted RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 FAM83BQ5T0W9 1011 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 GPATCH4Q5T3I0 446 aaKnown RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 RBM43Q6ZSC3 357 aaKnown RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 SPZ1Q9BXG8 430 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 GOPCQ9HD26 462 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 VPS54Q9P1Q0 977 aa10.52□□□□□ -0.73
HNRNPU-218ENST00000639064 PAPPA2Q9BXP8 1791 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 ZNF771Q7L3S4 317 aaPredicted RBP10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 ADGRF4Q8IZF3 695 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 FBXO18Q8NFZ0 1043 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.731e-11■□□□□ 9.3
HNRNPU-218ENST00000639064 PIGSQ96S52 555 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 LZTS2Q9BRK4 669 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 RIOX1Q9H6W3 641 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 SH2D4AQ9H788 454 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 ELP3Q9H9T3 547 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 CGNQ9P2M7 1197 aaKnown RBP10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 SYNPO2Q9UMS6 1093 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 KCNJ14Q9UNX9 436 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 CSADQ9Y600 493 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 USP17L10C9JJH3 530 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 ZNF165P49910 485 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 PFKFB3Q16875 520 aaPredicted RBP10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 KRT40Q6A162 431 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 ANKRD13AQ8IZ07 590 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 ZNF280CQ8ND82 737 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 ZNF592Q92610 1267 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 PGBD1Q96JS3 809 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 WDR18Q9BV38 432 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 SCAND2PQ9GZW5 306 aaPredicted RBP10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 KIAA1683Q9H0B3 1180 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 JMJD4Q9H9V9 463 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 EMILIN3Q9NT22 766 aa10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 DDX41Q9UJV9 622 aaKnown RBP10.51□□□□□ -0.73
HNRNPU-218ENST00000639064 MYH6P13533 1939 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 SCG2P13521 617 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 SNAP25P60880 206 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 IKQ13123 557 aaPredicted RBP10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 ARID5BQ14865 1188 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 BICD2Q8TD16 824 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 WASF1Q92558 559 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 AS3MTQ9HBK9 375 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 USP27XA6NNY8 438 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 HMGCS2P54868 508 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 BACE1P56817 501 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 CEP135Q66GS9 1140 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 ARMC9Q7Z3E5 817 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 GPBP1L1Q9HC44 474 aaPredicted RBP10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 FBXO28Q9NVF7 368 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 AFG3L2Q9Y4W6 797 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 PAXBP1Q9Y5B6 917 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 PHIPQ8WWQ0 1821 aa10.5□□□□□ -0.73
HNRNPU-218ENST00000639064 CELF2O95319 508 aaKnown RBP10.49□□□□□ -0.73
HNRNPU-218ENST00000639064 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
HNRNPU-218ENST00000639064 SMARCA1P28370 1054 aa10.49□□□□□ -0.73
HNRNPU-218ENST00000639064 TRIM29Q14134 588 aa10.49□□□□□ -0.73
HNRNPU-218ENST00000639064 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms