RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 NEDD1Q8NHV4 660 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 NUP88Q99567 741 aaPredicted RBP9.45□□□□□ -0.9
GABRA1-216ENST00000637044 PSTPIP2Q9H939 334 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 ANAPC4Q9UJX5 808 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.45□□□□□ -0.9
GABRA1-216ENST00000637044 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
GABRA1-216ENST00000637044 ALAS1P13196 640 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 KIF22Q14807 665 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 SPECC1Q5M775 1068 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 TRIML1Q8N9V2 468 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 SH3GLB2Q9NR46 395 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 PPP2R3BQ9Y5P8 575 aa9.45□□□□□ -0.9
GABRA1-216ENST00000637044 EEF2P13639 858 aaKnown RBP9.44□□□□□ -0.9
GABRA1-216ENST00000637044 INF2Q27J81 1249 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 KCTD1Q719H9 257 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 IGDCC4Q8TDY8 1250 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 CEP95Q96GE4 821 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 AIFM3Q96NN9 605 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 AMNQ9BXJ7 453 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 GBA2Q9HCG7 927 aaPredicted RBP9.44□□□□□ -0.9
GABRA1-216ENST00000637044 ADM5C9JUS6 153 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 OR52Z1P0C646 297 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 LONP1P36776 959 aaKnown RBP9.44□□□□□ -0.9
GABRA1-216ENST00000637044 PTGDRQ13258 359 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 CCDC65Q8IXS2 484 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 TRPM4Q8TD43 1214 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 TMEM47Q9BQJ4 181 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 PNMA3Q9UL41 463 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 FZD9O00144 591 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 CCT6AP40227 531 aaKnown RBP9.44□□□□□ -0.9
GABRA1-216ENST00000637044 CCNA1P78396 465 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 CETN1Q12798 172 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 CABP7Q86V35 215 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 FAM177A1Q8N128 213 aaPredicted RBP9.44□□□□□ -0.9
GABRA1-216ENST00000637044 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
GABRA1-216ENST00000637044 MRPL11Q9Y3B7 192 aaKnown RBP9.44□□□□□ -0.9
GABRA1-216ENST00000637044 DDTLA6NHG4 134 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-216ENST00000637044 CFBP00751 764 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 GPS2Q13227 327 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 CT47A1Q5JQC4 288 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-216ENST00000637044 CNNM4Q6P4Q7 775 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 TAF1DQ9H5J8 278 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-216ENST00000637044 IFNKQ9P0W0 207 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 SERTAD1Q9UHV2 236 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 PCDHA1Q9Y5I3 950 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 TAF6LQ9Y6J9 622 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 PLEKHA8P1O95397 391 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 CDC27P30260 824 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 SLC16A2P36021 539 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 NDUFA8P51970 172 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 ANTXR2P58335 489 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 NR5A1Q13285 461 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 SPA17Q15506 151 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 FKBP1CQ5VVH2 108 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 KIAA1328Q86T90 577 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 KIF18AQ8NI77 898 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 ZC3H15Q8WU90 426 aaKnown RBP9.43□□□□□ -0.9
GABRA1-216ENST00000637044 PCDHAC2Q9Y5I4 1007 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 GAKO14976 1311 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 NMT2O60551 498 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 STAT2P52630 851 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 GRM4Q14833 912 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 C16orf86Q6ZW13 317 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 MTERF4Q7Z6M4 381 aaKnown RBP9.43□□□□□ -0.9
GABRA1-216ENST00000637044 LDHDQ86WU2 507 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 NCAPG2Q86XI2 1143 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 RGS22Q8NE09 1264 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 IDI2Q9BXS1 227 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 NMRK2Q9NPI5 230 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 ZBTB21Q9ULJ3 1066 aa9.43□□□□□ -0.9
GABRA1-216ENST00000637044 TCRBV5S4A2TA0A5A2 114 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 F5H6K3 240 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 CTNND1O60716 968 aaKnown RBP9.42□□□□□ -0.9
GABRA1-216ENST00000637044 HMGCS2P54868 508 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 KLRC3Q07444 240 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 PFKFB3Q16875 520 aaPredicted RBP9.42□□□□□ -0.9
GABRA1-216ENST00000637044 VPS36Q86VN1 386 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 SYCP3Q8IZU3 236 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 RBM46Q8TBY0 533 aaKnown RBP9.42□□□□□ -0.9
GABRA1-216ENST00000637044 PLIN2Q99541 437 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 KDM3AQ9Y4C1 1321 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 AK9Q5TCS8 1911 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 GCFC2P16383 781 aaKnown RBP9.42□□□□□ -0.9
GABRA1-216ENST00000637044 STX17P56962 302 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 PDE4DQ08499 809 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 ARHGEF6Q15052 776 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 FASTKD5Q7L8L6 764 aaKnown RBP9.42□□□□□ -0.9
GABRA1-216ENST00000637044 CAGE1Q8TC20 777 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 ZKSCAN4Q969J2 545 aaPredicted RBP9.42□□□□□ -0.9
GABRA1-216ENST00000637044 IL17RAQ96F46 866 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 AK8Q96MA6 479 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 MAGEF1Q9HAY2 307 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 CCPG1Q9ULG6 757 aa9.42□□□□□ -0.9
GABRA1-216ENST00000637044 ARFGEF2Q9Y6D5 1785 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms