RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 PFKFB2O60825 505 aa18.02■□□□□ 0.47
CTSD-207ENST00000636571 PHKBQ93100 1093 aa18.02■□□□□ 0.47
CTSD-207ENST00000636571 AGBL1Q96MI9 1066 aa18.02■□□□□ 0.47
CTSD-207ENST00000636571 PIGSQ96S52 555 aa18.02■□□□□ 0.47
CTSD-207ENST00000636571 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.47
CTSD-207ENST00000636571 SLKQ9H2G2 1235 aaPredicted RBP18.02■□□□□ 0.47
CTSD-207ENST00000636571 RANBP17Q9H2T7 1088 aaKnown RBP18.02■□□□□ 0.47
CTSD-207ENST00000636571 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.47
CTSD-207ENST00000636571 RIPK3Q9Y572 518 aa18.02■□□□□ 0.47
CTSD-207ENST00000636571 DOCK3Q8IZD9 2030 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 CNTNAP5Q8WYK1 1306 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 PPP1R11O60927 126 aaPredicted RBP18.01■□□□□ 0.47
CTSD-207ENST00000636571 HSPA1AP0DMV8 641 aaKnown RBP18.01■□□□□ 0.47
CTSD-207ENST00000636571 HSPA1BP0DMV9 641 aaKnown RBP18.01■□□□□ 0.47
CTSD-207ENST00000636571 RCAN1P53805 252 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 ERVK-9P63128 1117 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 ERVK-24P63145 666 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 NTRK3Q16288 839 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 CDC37Q16543 378 aaPredicted RBP18.01■□□□□ 0.47
CTSD-207ENST00000636571 CFHR5Q9BXR6 569 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 PORCNQ9H237 461 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 RBM28Q9NW13 759 aaKnown RBP18.01■□□□□ 0.47
CTSD-207ENST00000636571 SAGE1Q9NXZ1 904 aa18.01■□□□□ 0.47
CTSD-207ENST00000636571 CENPFP49454 3210 aa18■□□□□ 0.47
CTSD-207ENST00000636571 FOXN1O15353 648 aa18■□□□□ 0.47
CTSD-207ENST00000636571 HSP90AA1P07900 732 aaKnown RBP18■□□□□ 0.47
CTSD-207ENST00000636571 CTGFP29279 349 aa18■□□□□ 0.47
CTSD-207ENST00000636571 GCLCP48506 637 aaPredicted RBP18■□□□□ 0.47
CTSD-207ENST00000636571 QRICH1Q2TAL8 776 aa18■□□□□ 0.47
CTSD-207ENST00000636571 CCDC83Q8IWF9 413 aa18■□□□□ 0.47
CTSD-207ENST00000636571 ARHGAP39Q9C0H5 1083 aa18■□□□□ 0.47
CTSD-207ENST00000636571 RABGAP1Q9Y3P9 1069 aa18■□□□□ 0.47
CTSD-207ENST00000636571 CASP8AP2Q9UKL3 1982 aa18■□□□□ 0.47
CTSD-207ENST00000636571 CTDNEP1O95476 244 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 FAM110CQ1W6H9 321 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 GTF3C6Q969F1 213 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 MTMR8Q96EF0 704 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 SPATC1LQ9H0A9 340 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 MORF4L1Q9UBU8 362 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 MGAMO43451 1857 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 GPR25O00155 361 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 ZBED4O75132 1171 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 GNAQP50148 359 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 USH1GQ495M9 461 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 SNRNP48Q6IEG0 339 aaKnown RBP17.99■□□□□ 0.47
CTSD-207ENST00000636571 IL27Q8NEV9 243 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 GPRC5AQ8NFJ5 357 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 ZSCAN31Q96LW9 406 aaPredicted RBP17.99■□□□□ 0.47
CTSD-207ENST00000636571 MOV10L1Q9BXT6 1211 aaKnown RBP17.99■□□□□ 0.47
CTSD-207ENST00000636571 EFCC1Q9HA90 598 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 HOMER2Q9NSB8 354 aa17.99■□□□□ 0.47
CTSD-207ENST00000636571 HTTP42858 3142 aa17.98■□□□□ 0.47
CTSD-207ENST00000636571 MB21D1Q8N884 522 aa17.98■□□□□ 0.47
CTSD-207ENST00000636571 ZNF296Q8WUU4 475 aaPredicted RBP17.98■□□□□ 0.47
CTSD-207ENST00000636571 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
CTSD-207ENST00000636571 V9GY48 417 aaPredicted RBP17.98■□□□□ 0.47
CTSD-207ENST00000636571 STAT3P40763 770 aa17.97■□□□□ 0.47
CTSD-207ENST00000636571 LZTS2Q9BRK4 669 aa17.97■□□□□ 0.47
CTSD-207ENST00000636571 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 ZBTB5O15062 677 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 JAK2O60674 1132 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 GTF3C2Q8WUA4 911 aaPredicted RBP17.96■□□□□ 0.47
CTSD-207ENST00000636571 GPKOWQ92917 476 aaPredicted RBP eCLIP17.96■□□□□ 0.47
CTSD-207ENST00000636571 SLC26A6Q9BXS9 759 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 TEX13BQ9BXU2 312 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 SH2B1Q9NRF2 756 aaPredicted RBP17.96■□□□□ 0.47
CTSD-207ENST00000636571 CCPG1Q9ULG6 757 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 CPLX1O14810 134 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 ICAM1P05362 532 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 HSPA8P11142 646 aaKnown RBP17.96■□□□□ 0.47
CTSD-207ENST00000636571 ALAS1P13196 640 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 IFNAR1P17181 557 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 ERCC3P19447 782 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 SP3Q02447 781 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 WDR78Q5VTH9 848 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 NCAPG2Q86XI2 1143 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 CD99L2Q8TCZ2 262 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 COA7Q96BR5 231 aa17.96■□□□□ 0.47
CTSD-207ENST00000636571 RRP36Q96EU6 259 aaKnown RBP17.96■□□□□ 0.47
CTSD-207ENST00000636571 ATP2A1O14983 1001 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 CUL4AQ13619 759 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 PKN1Q16512 942 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 RIOX2Q8IUF8 465 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 AIFM3Q96NN9 605 aa17.95■□□□□ 0.46
CTSD-207ENST00000636571 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 FDX1P10109 184 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 LBX1P52954 281 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 OAZ1P54368 228 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 LACTBP83111 547 aaPredicted RBP17.94■□□□□ 0.46
CTSD-207ENST00000636571 FBXO11Q86XK2 927 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 NSUN7Q8NE18 718 aaKnown RBP17.94■□□□□ 0.46
CTSD-207ENST00000636571 DDX11Q96FC9 970 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 ZNFX1Q9P2E3 1918 aaKnown RBP17.94■□□□□ 0.46
CTSD-207ENST00000636571 TYW1BQ6NUM6 668 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 SHISA4Q96DD7 197 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms