RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	RGS16	O15492	202 aa	Predicted RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	FAM13A	O94988	1023 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	GNA11	P29992	359 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NR5A1	Q13285	461 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SFMBT2	Q5VUG0	894 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MGARP	Q8TDB4	240 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	FAM89A	Q96GI7	184 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TUBGCP2	Q9BSJ2	902 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TRIM6	Q9C030	488 aa	Predicted RBP	10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	STIM2	Q9P246	746 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	LRWD1	Q9UFC0	647 aa		10.05	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RIMBP2	O15034	1052 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RBBP5	Q15291	538 aa	Known RBP	10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	AKNAD1	Q5T1N1	836 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TAOK1	Q7L7X3	1001 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC197	Q8NCU1	140 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	LCMT1	Q9UIC8	334 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048		H0YIN7	160 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ALDH3A1	P30838	453 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PTGDR	Q13258	359 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DENND2C	Q68D51	928 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PEX26	Q7Z412	305 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCNL1	Q9UK58	526 aa	Predicted RBP	10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	IGSF1	Q8N6C5	1336 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	FOXN1	O15353	648 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	HIP1R	O75146	1068 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RASSF7	Q02833	373 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	EHHADH	Q08426	723 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC38	Q502W7	563 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	IQCD	Q96DY2	449 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NAP1L3	Q99457	506 aa	Predicted RBP	10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DPH5	Q9H2P9	285 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ARHGEF10L	Q9HCE6	1279 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TAF6L	Q9Y6J9	622 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TET3	O43151	1660 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	QRICH2	Q9H0J4	1663 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CCDC160	A6NGH7	325 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	VWA3B	Q502W6	1294 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	LRRC24	Q50LG9	513 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DPY19L2	Q6NUT2	758 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TC2N	Q8N9U0	490 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	FANCB	Q8NB91	859 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ENGASE	Q8NFI3	743 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	FAM212A	Q96EL1	285 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	FOXP1	Q9H334	677 aa	Predicted RBP	10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PLCB1	Q9NQ66	1216 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MCM9	Q9NXL9	1143 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PCDHB6	Q9Y5E3	794 aa		10.04	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PLEKHG3	A1L390	1219 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ECM2	O94769	699 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MOCS3	O95396	460 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	LARGE2	Q8N3Y3	721 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	OSBP2	Q969R2	916 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	NFU1	Q9UMS0	254 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048		M0QZ92	97 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	KRIT1	O00522	736 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SASH3	O75995	380 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TSGA10IP	Q3SY00	556 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PARP10	Q53GL7	1025 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SHC4	Q6S5L8	630 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	LRRC31	Q6UY01	552 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DYM	Q7RTS9	669 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ZNF496	Q96IT1	587 aa	Predicted RBP	10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	EPSTI1	Q96J88	318 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SPHKAP	Q2M3C7	1700 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CASP1	P29466	404 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MXRA7	P84157	204 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	TEX2	Q8IWB9	1127 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	STMN2	Q93045	179 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PNKP	Q96T60	521 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	VCX	Q9H320	206 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	VIPAS39	Q9H9C1	493 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	GAS8	O95995	478 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PRR29	P0C7W0	189 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	ATP5D	P30049	168 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PPP2R5B	Q15173	497 aa		10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	RNF10	Q8N5U6	811 aa	Known RBP	10.03	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	IRS4	O14654	1257 aa	Predicted RBP	10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	MMP1	P03956	469 aa		10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	EEF1G	P26641	437 aa	Known RBP	10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	IFNAR2	P48551	515 aa		10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CROCCP2	Q86T23	111 aa		10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	DCAF5	Q96JK2	942 aa		10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	SRPRB	Q9Y5M8	271 aa	Known RBP	10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PCDH11X	Q9BZA7	1347 aa		10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	PCDH11Y	Q9BZA8	1340 aa		10.02	□□□□□ -0.8
ARHGEF9-222	ENST00000636048	CTNND1	O60716	968 aa	Known RBP	10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	METTL16	Q86W50	562 aa	Known RBP	10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	HACE1	Q8IYU2	909 aa		10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	ANKRD42	Q8N9B4	389 aa		10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	NOA1	Q8NC60	698 aa	Known RBP	10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	PAGE5	Q96GU1	130 aa		10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	CNOT6L	Q96LI5	555 aa	Known RBP	10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	KLC4	Q9NSK0	619 aa		10.02	□□□□□ -0.81
ARHGEF9-222	ENST00000636048	RWDD2A	Q9UIY3	292 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms