RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SAPCD2Q86UD0 394 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 ZSCAN29Q8IWY8 852 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 Q8N1X5 172 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 EAF1Q96JC9 268 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 ZNF512BQ96KM6 892 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 JMJD8Q96S16 334 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 RBM15Q96T37 977 aaKnown RBP eCLIP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 SLITRK6Q9H5Y7 841 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 BCAS3Q9H6U6 928 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 AP5S1Q9NUS5 200 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 ST6GALNAC2Q9UJ37 374 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 DBR1Q9UK59 544 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 IRS2Q9Y4H2 1338 aa2.14□□□□□ -2.07
SMARCB1-209ENST00000635578 A0A1W2PQ45 241 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 A0A1W2PQY0 241 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 SH3D21A4FU49 640 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 SIGLEC6O43699 453 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 UBOX5O94941 541 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 F13A1P00488 732 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 RAG1P15918 1043 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 GNA15P30679 374 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 PRR5P85299 388 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 CAP1Q01518 475 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 MVKQ03426 396 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 DLX2Q07687 328 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 NR1I3Q14994 352 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 ARSHQ5FYA8 562 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 CRTC3Q6UUV7 619 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 ERICH6Q7L0X2 663 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 JAMLQ86YT9 394 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 NAT16Q8N8M0 369 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 PHC3Q8NDX5 983 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 DVL3Q92997 716 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 KISS1RQ969F8 398 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 SAMD11Q96NU1 681 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 RXFP1Q9HBX9 757 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 CHST7Q9NS84 486 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 GFOD1Q9NXC2 390 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 ACSL6Q9UKU0 697 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 POLR3KQ9Y2Y1 108 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 ZNF536O15090 1300 aa2.13□□□□□ -2.07
SMARCB1-209ENST00000635578 FAM221AA4D161 298 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 F8W031 263 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 RGS13O14921 159 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 TLR3O15455 904 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 FZD7O75084 574 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 ZNF205O95201 554 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 PLATP00750 562 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 PF4P02776 101 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 CYBBP04839 570 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 ASGR2P07307 311 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 DBHP09172 617 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 GSTM1P09488 218 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 TGM1P22735 817 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 ACVRL1P37023 503 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 SARSP49591 514 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 CEBPAP49715 358 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 HTRA3P83110 453 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 KLF10Q13118 480 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 SMAD4Q13485 552 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 CAMK2GQ13555 558 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 TBC1D10BQ4KMP7 808 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 NBPF12Q5TAG4 269 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 CRIP3Q6Q6R5 217 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 PAQR3Q6TCH7 311 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 USP51Q70EK9 711 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 LIMS2Q7Z4I7 341 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 ZNF761Q86XN6 746 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 AEBP1Q8IUX7 1158 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 FBXO27Q8NI29 283 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 ALG3Q92685 438 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 NOX5Q96PH1 765 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 C1QTNF3Q9BXJ4 246 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 VPS11Q9H270 941 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 RNF19AQ9NV58 838 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 NTMQ9P121 344 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 ING1Q9UK53 422 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 TIMELESSQ9UNS1 1208 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 HS3ST3A1Q9Y663 406 aa2.12□□□□□ -2.07
SMARCB1-209ENST00000635578 CYR61O00622 381 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 CLEC3AO75596 197 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 AMHP03971 560 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 RLBP1P12271 317 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 VAV1P15498 845 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 ENDOUP21128 410 aaKnown RBP2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 PMLP29590 882 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 BMP8BP34820 402 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 CTSKP43235 329 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 FAM160A1Q05DH4 1040 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 MLECQ14165 292 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 GLB1LQ6UWU2 654 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 B3GNT8Q7Z7M8 397 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 CCDC84Q86UT8 332 aaPredicted RBP2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 USP48Q86UV5 1035 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 PALM2Q8IXS6 379 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 TTC9BQ8N6N2 239 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 TMEM52Q8NDY8 209 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 SMARCC2Q8TAQ2 1214 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 GATAD2BQ8WXI9 593 aa2.11□□□□□ -2.07
SMARCB1-209ENST00000635578 ZBTB8AQ96BR9 441 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms