RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	WDR18	Q9BV38	432 aa		6.7	□□□□□ -1.34
SMARCA2-222	ENST00000634403	NT5C1A	Q9BXI3	368 aa		6.7	□□□□□ -1.34
SMARCA2-222	ENST00000634403	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	KCNQ3	O43525	872 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	AOC2	O75106	756 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	HSP90AB1	P08238	724 aa	Known RBP	6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	GNAI3	P08754	354 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PHKG2	P15735	406 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CDK8	P49336	464 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	APOBR	Q0VD83	1088 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ANKRD45	Q5TZF3	282 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	IFNL2	Q8IZJ0	200 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	AGGF1	Q8N302	714 aa	eCLIP	6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	MEIS3	Q99687	375 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	TMPRSS13	Q9BYE2	586 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	RNF208	Q9H0X6	261 aa		6.69	□□□□□ -1.34
SMARCA2-222	ENST00000634403	NHSL1	Q5SYE7	1610 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PKD1L3	Q7Z443	1732 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SCN11A	Q9UI33	1791 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	MEGF6	O75095	1541 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	FAM181B	A6NEQ2	426 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	HMMR	O75330	724 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CILP	O75339	1184 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	BPNT1	O95861	308 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	GNAI2	P04899	355 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	MPP2	Q14168	576 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CHRNA2	Q15822	529 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	EXOSC6	Q5RKV6	272 aa	Known RBP	6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SLC4A10	Q6U841	1118 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SLC43A3	Q8NBI5	491 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	RASGRP4	Q8TDF6	673 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	DCAF5	Q96JK2	942 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	LNPK	Q9C0E8	428 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SLC52A2	Q9HAB3	445 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	RAD18	Q9NS91	495 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PCDHGC5	Q9Y5F6	944 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	WDR17	Q8IZU2	1322 aa		6.68	□□□□□ -1.34
SMARCA2-222	ENST00000634403	KDM6A	O15550	1401 aa	Predicted RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	MRC1	P22897	1456 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403		F8W735	103 aa	Predicted RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ALX3	O95076	343 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	APBA3	O96018	575 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	EIF2S2	P20042	333 aa	Known RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	DNAJA1	P31689	397 aa	Known RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ATP8B2	P98198	1209 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	RPL6	Q02878	288 aa	Known RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	INPP5A	Q14642	412 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SEZ6	Q53EL9	994 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	BMP2KL	Q5H9B9	411 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	LRFN4	Q6PJG9	635 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	REC114	Q7Z4M0	266 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	NKD1	Q969G9	470 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PLPPR2	Q96GM1	343 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	LRRC3	Q9BY71	257 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PHAX	Q9H814	394 aa	Known RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	DBF4	Q9UBU7	674 aa	Predicted RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	USP21	Q9UK80	565 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CSAD	Q9Y600	493 aa		6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.67	□□□□□ -1.34
SMARCA2-222	ENST00000634403	MEGF11	A6BM72	1044 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	DCDC2C	A8MYV0	355 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	TMPRSS2	O15393	492 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CYP27B1	O15528	508 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	EIF5B	O60841	1220 aa	Known RBP	6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ARID5A	Q03989	594 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CWF19L2	Q2TBE0	894 aa	Known RBP	6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	BEND3	Q5T5X7	828 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ZNF790	Q6PG37	636 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	TMEM130	Q8N3G9	435 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SREK1	Q8WXA9	508 aa	Known RBP	6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	DNAAF4	Q8WXU2	420 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ELMO3	Q96BJ8	720 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	LENG1	Q96BZ8	264 aa	Predicted RBP	6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	TBC1D32	Q96NH3	1257 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	NACC1	Q96RE7	527 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	USP44	Q9H0E7	712 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	UPF2	Q9HAU5	1272 aa	Known RBP	6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PRDM11	Q9NQV5	511 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	GINM1	Q9NU53	330 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	HYPK	Q9NX55	129 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	CHPF2	Q9P2E5	772 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PPP1R9A	Q9ULJ8	1098 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	AP4E1	Q9UPM8	1137 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	EFR3B	Q9Y2G0	817 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ABCA3	Q99758	1704 aa		6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	COL5A2	P05997	1499 aa	Predicted RBP	6.66	□□□□□ -1.34
SMARCA2-222	ENST00000634403	PARP4	Q9UKK3	1724 aa	Known RBP	6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ALDH1L1	O75891	902 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SLFN14	P0C7P3	912 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ADH5	P11766	374 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ATF4	P18848	351 aa	Predicted RBP	6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	NASP	P49321	788 aa	Predicted RBP	6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ID3	Q02535	119 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	ZC3H12A	Q5D1E8	599 aa	Known RBP	6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	FDX2	Q6P4F2	183 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	KSR2	Q6VAB6	950 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	HDX	Q7Z353	690 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	VPS37D	Q86XT2	251 aa		6.65	□□□□□ -1.34
SMARCA2-222	ENST00000634403	SLITRK4	Q8IW52	837 aa		6.65	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms