RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	NID2	Q14112	1375 aa		30.23	■■■□□ 2.43
UBE3A-222	ENST00000630907	CYTH3	O43739	400 aa		30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	ECM2	O94769	699 aa	Predicted RBP	30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	CDC27	P30260	824 aa		30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	CDC37	Q16543	378 aa	Predicted RBP	30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	SNRNP48	Q6IEG0	339 aa	Known RBP	30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	NOL8	Q76FK4	1167 aa	Known RBP	30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	RIOX2	Q8IUF8	465 aa		30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	CMTR1	Q8N1G2	835 aa	Known RBP	30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	SRBD1	Q8N5C6	995 aa	Known RBP	30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	SPZ1	Q9BXG8	430 aa		30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	PORCN	Q9H237	461 aa		30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	ZNF536	O15090	1300 aa		30.22	■■■□□ 2.43
UBE3A-222	ENST00000630907	SLC25A27	O95847	323 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	MAPK4	P31152	587 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	PSMC4	P43686	418 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	SLC4A3	P48751	1232 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	FCGRT	P55899	365 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	CCT2	P78371	535 aa	Known RBP	30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	SHCBP1	Q8NEM2	672 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	ARHGAP39	Q9C0H5	1083 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	EFCC1	Q9HA90	598 aa		30.21	■■■□□ 2.43
UBE3A-222	ENST00000630907	FMNL1	O95466	1100 aa	Predicted RBP	30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	ICAM1	P05362	532 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	ERCC3	P19447	782 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	COPB2	P35606	906 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	ADD1	P35611	737 aa	Known RBP	30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	ARHGEF6	Q15052	776 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	NCAPG2	Q86XI2	1143 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	MTMR8	Q96EF0	704 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	AGBL1	Q96MI9	1066 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	CWC22	Q9HCG8	908 aa	Known RBP	30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	PNMA2	Q9UL42	364 aa		30.2	■■■□□ 2.43
UBE3A-222	ENST00000630907	COL11A1	P12107	1806 aa	Predicted RBP	30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	ST18	O60284	1047 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	CTGF	P29279	349 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	STK3	Q13188	491 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	QRICH1	Q2TAL8	776 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	WDR78	Q5VTH9	848 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	CCDC82	Q8N4S0	544 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	PIGS	Q96S52	555 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	MROH8	Q9H579	483 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	CCPG1	Q9ULG6	757 aa		30.19	■■■□□ 2.42
UBE3A-222	ENST00000630907	HOMER1	Q86YM7	354 aa		30.18	■■■□□ 2.42
UBE3A-222	ENST00000630907	TRIM47	Q96LD4	638 aa		30.18	■■■□□ 2.42
UBE3A-222	ENST00000630907	SLK	Q9H2G2	1235 aa	Predicted RBP	30.18	■■■□□ 2.42
UBE3A-222	ENST00000630907	PRDM10	Q9NQV6	1147 aa		30.18	■■■□□ 2.42
UBE3A-222	ENST00000630907	LIMCH1	Q9UPQ0	1083 aa		30.18	■■■□□ 2.42
UBE3A-222	ENST00000630907	RIPK3	Q9Y572	518 aa		30.18	■■■□□ 2.42
UBE3A-222	ENST00000630907	TNPO2	O14787	897 aa	Known RBP	30.17	■■■□□ 2.42
UBE3A-222	ENST00000630907	ZBTB5	O15062	677 aa		30.17	■■■□□ 2.42
UBE3A-222	ENST00000630907	PFKFB2	O60825	505 aa		30.17	■■■□□ 2.42
UBE3A-222	ENST00000630907	CAP1	Q01518	475 aa		30.17	■■■□□ 2.42
UBE3A-222	ENST00000630907	PIBF1	Q8WXW3	757 aa		30.17	■■■□□ 2.42
UBE3A-222	ENST00000630907	RRP36	Q96EU6	259 aa	Known RBP	30.17	■■■□□ 2.42
UBE3A-222	ENST00000630907	NCOA5	Q9HCD5	579 aa	Known RBP	30.17	■■■□□ 2.42
UBE3A-222	ENST00000630907	ALAS1	P13196	640 aa		30.16	■■■□□ 2.42
UBE3A-222	ENST00000630907	ME3	Q16798	604 aa		30.16	■■■□□ 2.42
UBE3A-222	ENST00000630907	TKFC	Q3LXA3	575 aa		30.16	■■■□□ 2.42
UBE3A-222	ENST00000630907	GPR142	Q7Z601	462 aa		30.16	■■■□□ 2.42
UBE3A-222	ENST00000630907	PLEKHH3	Q7Z736	793 aa		30.16	■■■□□ 2.42
UBE3A-222	ENST00000630907	COA7	Q96BR5	231 aa		30.16	■■■□□ 2.42
UBE3A-222	ENST00000630907	PNMA6F	A0A0J9YX94	578 aa		30.15	■■■□□ 2.42
UBE3A-222	ENST00000630907	FUT2	Q10981	343 aa		30.15	■■■□□ 2.42
UBE3A-222	ENST00000630907	FBXO11	Q86XK2	927 aa		30.15	■■■□□ 2.42
UBE3A-222	ENST00000630907	CHST13	Q8NET6	341 aa		30.15	■■■□□ 2.42
UBE3A-222	ENST00000630907	SEC63	Q9UGP8	760 aa	Known RBP	30.15	■■■□□ 2.42
UBE3A-222	ENST00000630907	GNRH1	P01148	92 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	SCRN1	Q12765	414 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	TRERF1	Q96PN7	1200 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	AMN	Q9BXJ7	453 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	HOMER2	Q9NSB8	354 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	RNF146	Q9NTX7	359 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	FBXO40	Q9UH90	709 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	CNTNAP5	Q8WYK1	1306 aa		30.14	■■■□□ 2.42
UBE3A-222	ENST00000630907	CASP8AP2	Q9UKL3	1982 aa		30.14	■■■□□ 2.41
UBE3A-222	ENST00000630907	CPLX1	O14810	134 aa		30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	LARGE1	O95461	756 aa		30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	TAL1	P17542	331 aa	Predicted RBP	30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	HOXD10	P28358	340 aa		30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	USH1G	Q495M9	461 aa		30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	CPLX2	Q6PUV4	134 aa	Known RBP	30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	ZSCAN31	Q96LW9	406 aa	Predicted RBP	30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	IVNS1ABP	Q9Y6Y0	642 aa		30.13	■■■□□ 2.41
UBE3A-222	ENST00000630907	IFNAR1	P17181	557 aa		30.12	■■■□□ 2.41
UBE3A-222	ENST00000630907	TRAF1	Q13077	416 aa		30.12	■■■□□ 2.41
UBE3A-222	ENST00000630907	NTRK3	Q16288	839 aa		30.12	■■■□□ 2.41
UBE3A-222	ENST00000630907	ACAD9	Q9H845	621 aa		30.12	■■■□□ 2.41
UBE3A-222	ENST00000630907	TRIM17	Q9Y577	477 aa		30.12	■■■□□ 2.41
UBE3A-222	ENST00000630907		V9GY48	417 aa	Predicted RBP	30.12	■■■□□ 2.41
UBE3A-222	ENST00000630907	BAZ2B	Q9UIF8	2168 aa	Known RBP	30.12	■■■□□ 2.41
UBE3A-222	ENST00000630907	hCG_1642624	A0A1W2PR95	340 aa		30.11	■■■□□ 2.41
UBE3A-222	ENST00000630907	STRN	O43815	780 aa		30.11	■■■□□ 2.41
UBE3A-222	ENST00000630907	PPP1R11	O60927	126 aa	Predicted RBP	30.11	■■■□□ 2.41
UBE3A-222	ENST00000630907	PTPRE	P23469	700 aa		30.11	■■■□□ 2.41
UBE3A-222	ENST00000630907	OTOP1	Q7RTM1	612 aa		30.11	■■■□□ 2.41
UBE3A-222	ENST00000630907	NECAB1	Q8N987	351 aa		30.11	■■■□□ 2.41
UBE3A-222	ENST00000630907	ABCB11	O95342	1321 aa		30.11	■■■□□ 2.41
UBE3A-222	ENST00000630907	FCER1A	P12319	257 aa		30.1	■■■□□ 2.41
UBE3A-222	ENST00000630907	MCM2	P49736	904 aa		30.1	■■■□□ 2.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms