RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
APLF-207ENST00000627740 VWA5AO00534 786 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 JAK2O60674 1132 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 AOC2O75106 756 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 VEGFBP49765 207 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 HERVK_113P62684 666 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 TRAF1Q13077 416 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 FAM184AQ8NB25 1140 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 SMCR8Q8TEV9 937 aaPredicted RBP11.46□□□□□ -0.57
APLF-207ENST00000627740 PIBF1Q8WXW3 757 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 ATG4CQ96DT6 458 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
APLF-207ENST00000627740 P2RX7Q99572 595 aaKnown RBP11.46□□□□□ -0.57
APLF-207ENST00000627740 hCG_1984214I3L0E3 225 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 IGF2BP3O00425 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
APLF-207ENST00000627740 PPFIA3O75145 1194 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 ALDH1A1P00352 501 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 GJB2P29033 226 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 OAZ1P54368 228 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 PFKFB3Q16875 520 aaPredicted RBP11.45□□□□□ -0.58
APLF-207ENST00000627740 QRICH1Q2TAL8 776 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 ZNF713Q8N859 430 aaPredicted RBP11.45□□□□□ -0.58
APLF-207ENST00000627740 ZIC5Q96T25 663 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 hCG_1642624A0A1W2PR95 340 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 SCG2P13521 617 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
APLF-207ENST00000627740 CCDC174Q6PII3 467 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
APLF-207ENST00000627740 RBBP6Q7Z6E9 1792 aaKnown RBP11.44□□□□□ -0.58
APLF-207ENST00000627740 ICAM1P05362 532 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 CYP2C8P10632 490 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 FDPSP14324 419 aaKnown RBP11.44□□□□□ -0.58
APLF-207ENST00000627740 XBP1P17861 261 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 TAF1CQ15572 869 aaPredicted RBP11.44□□□□□ -0.58
APLF-207ENST00000627740 PKN1Q16512 942 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 FBXO11Q86XK2 927 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 IPO9Q96P70 1041 aaKnown RBP11.44□□□□□ -0.58
APLF-207ENST00000627740 AMNQ9BXJ7 453 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 SNAP25P60880 206 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 HEATR3Q7Z4Q2 680 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 FAM177A1Q8N128 213 aaPredicted RBP11.44□□□□□ -0.58
APLF-207ENST00000627740 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 CCDC12Q8WUD4 166 aaPredicted RBP11.44□□□□□ -0.58
APLF-207ENST00000627740 ZFYVE28Q9HCC9 887 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
APLF-207ENST00000627740 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
APLF-207ENST00000627740 DTNBO60941 627 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 PDCP20941 246 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 ALG1Q9BT22 464 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 PAGR1Q9BTK6 254 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 TEX13BQ9BXU2 312 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 SH3GLB2Q9NR46 395 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 BARHL2Q9NY43 387 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 CCPG1Q9ULG6 757 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 ZNF536O15090 1300 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 PCNTO95613 3336 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 PPP1R11O60927 126 aaPredicted RBP11.43□□□□□ -0.58
APLF-207ENST00000627740 TRIM29Q14134 588 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 PLS1Q14651 629 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 TMEM132BQ14DG7 1078 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 USH1GQ495M9 461 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 SNRNP48Q6IEG0 339 aaKnown RBP11.43□□□□□ -0.58
APLF-207ENST00000627740 CCDC148Q8NFR7 591 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 GPKOWQ92917 476 aaPredicted RBP eCLIP11.43□□□□□ -0.58
APLF-207ENST00000627740 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
APLF-207ENST00000627740 ZNF214Q9UL59 606 aaPredicted RBP11.43□□□□□ -0.58
APLF-207ENST00000627740 PCDHA1Q9Y5I3 950 aa11.43□□□□□ -0.58
APLF-207ENST00000627740 CEP350Q5VT06 3117 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 ABCB11O95342 1321 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 CA12O43570 354 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 COPB2P35606 906 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 STAT3P40763 770 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 NAPAP54920 295 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 TKFCQ3LXA3 575 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 C8orf76Q96K31 380 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 AGBL1Q96MI9 1066 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 SPATC1LQ9H0A9 340 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 BTBD7Q9P203 1132 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 RBPJLQ9UBG7 517 aa11.42□□□□□ -0.58
APLF-207ENST00000627740 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
APLF-207ENST00000627740 STXBP3O00186 592 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 PDIA4P13667 645 aaKnown RBP11.41□□□□□ -0.58
APLF-207ENST00000627740 ERVK-9P63128 1117 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 ERVK-24P63145 666 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 CCNA1P78396 465 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 LARP1BQ659C4 914 aaKnown RBP11.41□□□□□ -0.58
APLF-207ENST00000627740 RGS22Q8NE09 1264 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 GPRC5AQ8NFJ5 357 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 COA7Q96BR5 231 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 AIFM3Q96NN9 605 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 MORF4L1Q9UBU8 362 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 ADGRA2Q96PE1 1338 aa11.41□□□□□ -0.58
APLF-207ENST00000627740 TLR2O60603 784 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms