RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 ZBTB43O43298 467 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 PEX10O60683 326 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 ECM2O94769 699 aaPredicted RBP22.16■■□□□ 1.14
CNOT9-209ENST00000627282 SYT1P21579 422 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 FAM110CQ1W6H9 321 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 FAM160B2Q86V87 743 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 CCDC144CPQ8IYA2 1237 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 ANKRD13CQ8N6S4 541 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 PRPF38AQ8NAV1 312 aaKnown RBP22.16■■□□□ 1.14
CNOT9-209ENST00000627282 ADAMTS5Q9UNA0 930 aa22.16■■□□□ 1.14
CNOT9-209ENST00000627282 GOLGA8BA8MQT2 603 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 STX6O43752 255 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 FMNL1O95466 1100 aaPredicted RBP22.15■■□□□ 1.14
CNOT9-209ENST00000627282 CALM1P0DP23 149 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 CALM2P0DP24 149 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 CALM3P0DP25 149 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 PDIA4P13667 645 aaKnown RBP22.15■■□□□ 1.14
CNOT9-209ENST00000627282 PRMT2P55345 433 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 FCGRTP55899 365 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 IKQ13123 557 aaPredicted RBP22.15■■□□□ 1.14
CNOT9-209ENST00000627282 SLC35G1Q2M3R5 365 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 FOXD4L5Q5VV16 416 aaPredicted RBP22.15■■□□□ 1.14
CNOT9-209ENST00000627282 SYNE3Q6ZMZ3 975 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 CHURC1Q8WUH1 139 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 FOXD4L4Q8WXT5 416 aaPredicted RBP22.15■■□□□ 1.14
CNOT9-209ENST00000627282 UBA5Q9GZZ9 404 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 TXNRD2Q9NNW7 524 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 RBPJLQ9UBG7 517 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 PRR12Q9ULL5 1215 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 PTCH2Q9Y6C5 1203 aa22.15■■□□□ 1.14
CNOT9-209ENST00000627282 BAZ2BQ9UIF8 2168 aaKnown RBP22.15■■□□□ 1.14
CNOT9-209ENST00000627282 KLRF2D3W0D1 207 aa22.14■■□□□ 1.14
CNOT9-209ENST00000627282 ZSCAN22P10073 491 aaPredicted RBP22.14■■□□□ 1.14
CNOT9-209ENST00000627282 FANCBQ8NB91 859 aa22.14■■□□□ 1.14
CNOT9-209ENST00000627282 CTCFLQ8NI51 663 aaPredicted RBP22.14■■□□□ 1.14
CNOT9-209ENST00000627282 GTF3C6Q969F1 213 aa22.14■■□□□ 1.14
CNOT9-209ENST00000627282 SRRDQ9UH36 339 aa22.14■■□□□ 1.14
CNOT9-209ENST00000627282 NAP1L2Q9ULW6 460 aaPredicted RBP22.14■■□□□ 1.14
CNOT9-209ENST00000627282 VWA5AO00534 786 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 CNMDO75829 334 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 HOXD10P28358 340 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 PDIA3P30101 505 aaKnown RBP22.13■■□□□ 1.13
CNOT9-209ENST00000627282 RCAN1P53805 252 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 SYDE2Q5VT97 1194 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 ARMC5Q96C12 935 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 FAM217BQ9NTX9 383 aaPredicted RBP22.13■■□□□ 1.13
CNOT9-209ENST00000627282 LMBRD1Q9NUN5 540 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 A0A0G2JMZ2 1700 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 CENPFP49454 3210 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 NBPF11Q86T75 865 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 REPS2Q8NFH8 660 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 GTF3C2Q8WUA4 911 aaPredicted RBP22.13■■□□□ 1.13
CNOT9-209ENST00000627282 BTBD7Q9P203 1132 aa22.13■■□□□ 1.13
CNOT9-209ENST00000627282 NID2Q14112 1375 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 GOLGA8AA7E2F4 631 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 PFKFB2O60825 505 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 PLEKHA8P1O95397 391 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 CDC27P30260 824 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 KIF5BP33176 963 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 RTN1Q16799 776 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 ZNF274Q96GC6 653 aaPredicted RBP22.12■■□□□ 1.13
CNOT9-209ENST00000627282 PAGR1Q9BTK6 254 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 SLC38A10Q9HBR0 1119 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 MORF4L1Q9UBU8 362 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 RABGAP1Q9Y3P9 1069 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 MGAMO43451 1857 aa22.12■■□□□ 1.13
CNOT9-209ENST00000627282 CYTH3O43739 400 aa22.11■■□□□ 1.13
CNOT9-209ENST00000627282 RGS19P49795 217 aa22.11■■□□□ 1.13
CNOT9-209ENST00000627282 METAP2P50579 478 aaKnown RBP eCLIP22.11■■□□□ 1.13
CNOT9-209ENST00000627282 SOX10P56693 466 aa22.11■■□□□ 1.13
CNOT9-209ENST00000627282 SNAP25P60880 206 aa22.11■■□□□ 1.13
CNOT9-209ENST00000627282 STK3Q13188 491 aa22.11■■□□□ 1.13
CNOT9-209ENST00000627282 TMEM132BQ14DG7 1078 aa22.11■■□□□ 1.13
CNOT9-209ENST00000627282 ADGRF4Q8IZF3 695 aa22.11■■□□□ 1.13
CNOT9-209ENST00000627282 Q3C1V9 767 aa22.1■■□□□ 1.13
CNOT9-209ENST00000627282 SLC9C1Q4G0N8 1177 aa22.1■■□□□ 1.13
CNOT9-209ENST00000627282 TMTC3Q6ZXV5 915 aa22.1■■□□□ 1.13
CNOT9-209ENST00000627282 CMTR1Q8N1G2 835 aaKnown RBP22.1■■□□□ 1.13
CNOT9-209ENST00000627282 SRBD1Q8N5C6 995 aaKnown RBP22.1■■□□□ 1.13
CNOT9-209ENST00000627282 MB21D1Q8N884 522 aa22.1■■□□□ 1.13
CNOT9-209ENST00000627282 ZNF214Q9UL59 606 aaPredicted RBP22.1■■□□□ 1.13
CNOT9-209ENST00000627282 MTMR6Q9Y217 621 aa22.1■■□□□ 1.13
CNOT9-209ENST00000627282 COL11A1P12107 1806 aaPredicted RBP22.1■■□□□ 1.13
CNOT9-209ENST00000627282 PDCP20941 246 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 ADD1P35611 737 aaKnown RBP22.09■■□□□ 1.13
CNOT9-209ENST00000627282 PRKCZQ05513 592 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 LLPHQ9BRT6 129 aaKnown RBP22.09■■□□□ 1.13
CNOT9-209ENST00000627282 RANBP17Q9H2T7 1088 aaKnown RBP22.09■■□□□ 1.13
CNOT9-209ENST00000627282 RIOX1Q9H6W3 641 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 JMJD4Q9H9V9 463 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 NCOA5Q9HCD5 579 aaKnown RBP22.09■■□□□ 1.13
CNOT9-209ENST00000627282 TNPO2O14787 897 aaKnown RBP22.09■■□□□ 1.13
CNOT9-209ENST00000627282 F13A1P00488 732 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 GNAQP50148 359 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 ERVK-9P63128 1117 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 ERVK-24P63145 666 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 CCT2P78371 535 aaKnown RBP22.09■■□□□ 1.13
CNOT9-209ENST00000627282 KLHL40Q2TBA0 621 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 VAT1LQ9HCJ6 419 aa22.09■■□□□ 1.13
CNOT9-209ENST00000627282 RBM28Q9NW13 759 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms