RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 PPP1R16BQ96T49 567 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 DSCC1Q9BVC3 393 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 SNTG2Q9NY99 539 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 LRP2BPQ9P2M1 347 aa6.3□□□□□ -1.4
CDKL5-207ENST00000624700 SSU72P8A0A1W2PR75 194 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 TSPAN15O95858 294 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 GLI1P08151 1106 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 TPP2P29144 1249 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-207ENST00000624700 ZNF445P59923 1031 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 POU4F1Q01851 419 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 GRB10Q13322 594 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 RASA3Q14644 834 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 BMS1Q14692 1282 aaKnown RBP6.29□□□□□ -1.4
CDKL5-207ENST00000624700 KIRREL1Q96J84 757 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 CARS2Q9HA77 564 aaKnown RBP6.29□□□□□ -1.4
CDKL5-207ENST00000624700 SEMA3GQ9NS98 782 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 ZSWIM5Q9P217 1185 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 SUSD2Q9UGT4 822 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 AKT3Q9Y243 479 aa6.29□□□□□ -1.4
CDKL5-207ENST00000624700 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 CCDC85CA6NKD9 419 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 B2RBV5 119 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 SHOXO15266 292 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 PCBP3P57721 371 aaKnown RBP6.28□□□□□ -1.4
CDKL5-207ENST00000624700 HSP90AA2PQ14568 343 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-207ENST00000624700 TMEM67Q5HYA8 995 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 RNF111Q6ZNA4 994 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 FIBCD1Q8N539 461 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 LINC00116Q8NCU8 138 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 FGD4Q96M96 766 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 ATP13A1Q9HD20 1204 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 FAM86C1Q9NVL1 165 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 GFOD1Q9NXC2 390 aa6.28□□□□□ -1.4
CDKL5-207ENST00000624700 CCDC163A0A0D9SF12 145 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 H3BS24 57 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 PRAMEF1O95521 474 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 CFPP27918 469 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 GDNFP39905 211 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 GAB4Q2WGN9 574 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 MRM1Q6IN84 353 aaKnown RBP6.27□□□□□ -1.41
CDKL5-207ENST00000624700 PRR23BQ6ZRT6 265 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 TMC3Q7Z5M5 1100 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 ZSCAN18Q8TBC5 510 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-207ENST00000624700 PPP1R14AQ96A00 147 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 CCDC120Q96HB5 630 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 IPO9Q96P70 1041 aaKnown RBP6.27□□□□□ -1.41
CDKL5-207ENST00000624700 HDAC8Q9BY41 377 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
CDKL5-207ENST00000624700 BMP8BP34820 402 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 AMPD2Q01433 879 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 SSRP1Q08945 709 aaKnown RBP6.26□□□□□ -1.41
CDKL5-207ENST00000624700 SNW1Q13573 536 aaKnown RBP6.26□□□□□ -1.41
CDKL5-207ENST00000624700 SLC10A6Q3KNW5 377 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 SYDE1Q6ZW31 735 aaPredicted RBP6.26□□□□□ -1.41
CDKL5-207ENST00000624700 ANKLE2Q86XL3 938 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 LRRC56Q8IYG6 542 aaPredicted RBP6.26□□□□□ -1.41
CDKL5-207ENST00000624700 BRF1Q92994 677 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 TCTN2Q96GX1 697 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 SLC26A8Q96RN1 970 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 DNAJC7Q99615 494 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 SPATA9Q9BWV2 254 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 NOL6Q9H6R4 1146 aaKnown RBP6.26□□□□□ -1.41
CDKL5-207ENST00000624700 C19orf73Q9NVV2 129 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 ZMYM5Q9UJ78 669 aa6.26□□□□□ -1.41
CDKL5-207ENST00000624700 TLDC2A0PJX2 215 aa6.25□□□□□ -1.41
CDKL5-207ENST00000624700 FAM221BA6H8Z2 402 aa6.25□□□□□ -1.41
CDKL5-207ENST00000624700 LTKP29376 864 aa6.25□□□□□ -1.41
CDKL5-207ENST00000624700 HOXC12P31275 282 aa6.25□□□□□ -1.41
CDKL5-207ENST00000624700 CREG2Q8IUH2 290 aa6.25□□□□□ -1.41
CDKL5-207ENST00000624700 USHBP1Q8N6Y0 703 aa6.25□□□□□ -1.41
CDKL5-207ENST00000624700 ZNF513Q8N8E2 541 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-207ENST00000624700 THAP3Q8WTV1 239 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-207ENST00000624700 CGGBP1Q9UFW8 167 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-207ENST00000624700 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
CDKL5-207ENST00000624700 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
CDKL5-207ENST00000624700 SHISA3A0PJX4 238 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 CPP00450 1065 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 ITGAVP06756 1048 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 VAV1P15498 845 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 C1QL4Q86Z23 238 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 SIAH1Q8IUQ4 282 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 TRIM59Q8IWR1 403 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 JMYQ8N9B5 988 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 ZBTB38Q8NAP3 1195 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-207ENST00000624700 MRGPRX3Q96LB0 322 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 KRTAP4-2Q9BYR5 136 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 CYP26B1Q9NR63 512 aa6.24□□□□□ -1.41
CDKL5-207ENST00000624700 TRAV20A0A0B4J274 112 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 CLSTN1O94985 981 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 CANXP27824 592 aaKnown RBP6.23□□□□□ -1.41
CDKL5-207ENST00000624700 PPP2R5DQ14738 602 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 SCUBE1Q8IWY4 988 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 SYNPOQ8N3V7 929 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 FBXO15Q8NCQ5 510 aaPredicted RBP6.23□□□□□ -1.41
CDKL5-207ENST00000624700 ZSWIM2Q8NEG5 633 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 ADCY4Q8NFM4 1077 aa6.23□□□□□ -1.41
CDKL5-207ENST00000624700 ZDHHC15Q96MV8 337 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms