RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 EHHADHQ08426 723 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 NAA35Q5VZE5 725 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 TRIM68Q6AZZ1 485 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 POTEAQ6S8J7 498 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 CROCCP2Q86T23 111 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 SYCE1Q8N0S2 351 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 SDR42E1Q8WUS8 393 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 FNBP1Q96RU3 617 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 ANKRD2Q9GZV1 360 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 SLC39A2Q9NP94 309 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 SAMSN1Q9NSI8 373 aaKnown RBP6.22□□□□□ -1.41
ERCC6-213ENST00000624341 BIN2Q9UBW5 565 aaPredicted RBP6.22□□□□□ -1.41
ERCC6-213ENST00000624341 AMFRQ9UKV5 643 aa6.22□□□□□ -1.41
ERCC6-213ENST00000624341 BACH1O14867 736 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 IKBKBO14920 756 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 PDE6AP16499 860 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 TECP42680 631 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 DDB1Q16531 1140 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 FAM184BQ9ULE4 1060 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 DNM3Q9UQ16 869 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 PHLPP2Q6ZVD8 1323 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 GTPBP6O43824 516 aaPredicted RBP6.21□□□□□ -1.41
ERCC6-213ENST00000624341 PEX19P40855 299 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 ADCY7P51828 1080 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 POLR2FP61218 127 aaKnown RBP6.21□□□□□ -1.41
ERCC6-213ENST00000624341 TTLL12Q14166 644 aaPredicted RBP6.21□□□□□ -1.41
ERCC6-213ENST00000624341 PROSER3Q2NL68 480 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 WDR44Q5JSH3 913 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF354CQ86Y25 554 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 REXO1Q8N1G1 1221 aaKnown RBP6.21□□□□□ -1.41
ERCC6-213ENST00000624341 CCDC24Q8N4L8 307 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 MYCT1Q8N699 235 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 TBC1D31Q96DN5 1066 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 MAK16Q9BXY0 300 aaKnown RBP6.21□□□□□ -1.41
ERCC6-213ENST00000624341 RAB17Q9H0T7 212 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 NUCKS1Q9H1E3 243 aaKnown RBP6.21□□□□□ -1.41
ERCC6-213ENST00000624341 MRPL44Q9H9J2 332 aaKnown RBP6.21□□□□□ -1.41
ERCC6-213ENST00000624341 POLR3EQ9NVU0 708 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 HDAC9Q9UKV0 1011 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 CDC42BPGQ6DT37 1551 aa6.21□□□□□ -1.41
ERCC6-213ENST00000624341 TNKSO95271 1327 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 CARMIL3Q8ND23 1372 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 SMCO2A6NFE2 343 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 RPN1P04843 607 aaKnown RBP6.21□□□□□ -1.42
ERCC6-213ENST00000624341 RASSF7Q02833 373 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 RNF10Q8N5U6 811 aaKnown RBP6.21□□□□□ -1.42
ERCC6-213ENST00000624341 NAP1L4Q99733 375 aaKnown RBP6.21□□□□□ -1.42
ERCC6-213ENST00000624341 VEZTQ9HBM0 779 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 ANAPC4Q9UJX5 808 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 COL22A1Q8NFW1 1626 aaPredicted RBP6.21□□□□□ -1.42
ERCC6-213ENST00000624341 B4DLN1 442 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 TXNDC9O14530 226 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 ANKRD20A3Q5VUR7 823 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC62Q6P9F0 684 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 SDCCAG8Q86SQ7 713 aaPredicted RBP6.21□□□□□ -1.42
ERCC6-213ENST00000624341 MAPKAPK5Q8IW41 473 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 BLIDQ8IZY5 108 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC110Q8TBZ0 833 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 PDLIM2Q96JY6 352 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 ORAI2Q96SN7 254 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 KRT12Q99456 494 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 PLCB1Q9NQ66 1216 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 ARHGEF35A5YM69 484 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 TBC1D8O95759 1140 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 RPSAP08865 295 aaKnown RBP6.21□□□□□ -1.42
ERCC6-213ENST00000624341 CXCR5P32302 372 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 STAT1P42224 750 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 IFNAR2P48551 515 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 PSMD6Q15008 389 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 E2F5Q15329 346 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 TTLL7Q6ZT98 887 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 SEPT14Q6ZU15 432 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 MYOCDQ8IZQ8 938 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 RAB3IL1Q8TBN0 382 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 MIPOL1Q8TD10 442 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 GPKOWQ92917 476 aaPredicted RBP eCLIP6.21□□□□□ -1.42
ERCC6-213ENST00000624341 EXOC4Q96A65 974 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 NYXQ9GZU5 481 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 PCDH11XQ9BZA7 1347 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 PCDH11YQ9BZA8 1340 aa6.21□□□□□ -1.42
ERCC6-213ENST00000624341 DDX39AO00148 427 aaKnown RBP6.2□□□□□ -1.42
ERCC6-213ENST00000624341 RESTQ13127 1097 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 TUBGCP2Q9BSJ2 902 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 VPS37BQ9H9H4 285 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 ABCB6Q9NP58 842 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 ZCCHC17Q9NP64 241 aaKnown RBP6.2□□□□□ -1.42
ERCC6-213ENST00000624341 HOMER3Q9NSC5 361 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 KLHL14Q9P2G3 628 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 METP08581 1390 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 NDC80O14777 642 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 HIP1RO75146 1068 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 KIF23Q02241 960 aaPredicted RBP6.2□□□□□ -1.42
ERCC6-213ENST00000624341 CASP8Q14790 479 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 APOA5Q6Q788 366 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 OGFOD1Q8N543 542 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 PUS3Q9BZE2 481 aaKnown RBP6.2□□□□□ -1.42
ERCC6-213ENST00000624341 ZDHHC9Q9Y397 364 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 KDRP35968 1356 aa6.2□□□□□ -1.42
ERCC6-213ENST00000624341 C1orf167Q5SNV9 1468 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms