RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 CCND3P30281 292 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-218ENST00000622755 RNF20Q5VTR2 975 aa14.44□□□□□ -0.1
CBWD3-218ENST00000622755 NBPF3Q9H094 633 aa14.44□□□□□ -0.1
CBWD3-218ENST00000622755 ZSWIM5Q9P217 1185 aa14.44□□□□□ -0.1
CBWD3-218ENST00000622755 DDX20Q9UHI6 824 aaKnown RBP14.44□□□□□ -0.1
CBWD3-218ENST00000622755 PFASO15067 1338 aa14.44□□□□□ -0.1
CBWD3-218ENST00000622755 TNKSO95271 1327 aa14.44□□□□□ -0.1
CBWD3-218ENST00000622755 FRMPD2Q68DX3 1309 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-218ENST00000622755 COBLO75128 1261 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 PGK2P07205 417 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 PDHBP11177 359 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 ASPRV1Q53RT3 343 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 ARRDC4Q8NCT1 418 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 TRERF1Q96PN7 1200 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 MPHOSPH6Q99547 160 aaKnown RBP14.43□□□□□ -0.1
CBWD3-218ENST00000622755 TINF2Q9BSI4 451 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 ANO2Q9NQ90 1003 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 FLRT1Q9NZU1 646 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 OGDHLQ9ULD0 1010 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 TACC3Q9Y6A5 838 aa14.43□□□□□ -0.1
CBWD3-218ENST00000622755 POTEB2H3BUK9 544 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 SEPT4O43236 478 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 CDC45O75419 566 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 ICAM1P05362 532 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 PARP1P09874 1014 aaKnown RBP14.42□□□□□ -0.1
CBWD3-218ENST00000622755 PTH1RQ03431 593 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 ZNF543Q08ER8 600 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 PAWRQ96IZ0 340 aaKnown RBP14.42□□□□□ -0.1
CBWD3-218ENST00000622755 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 C11orf49Q9H6J7 331 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
CBWD3-218ENST00000622755 KBTBD13C9JR72 458 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 IFIT3O14879 490 aaKnown RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 EVI5O60447 810 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 CYP21A2P08686 494 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 CYBAP13498 195 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 SLC16A2P36021 539 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 ZNF792Q3KQV3 632 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 ERICH6BQ5W0A0 696 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 ZNF467Q7Z7K2 595 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 ANKS1AQ92625 1134 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 MAP4K1Q92918 833 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 RBM8AQ9Y5S9 174 aaKnown RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 B4DLN1 442 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 E7EWF7 191 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 RARBP10826 455 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 MRPL12P52815 198 aaKnown RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 TRAF1Q13077 416 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 WTAPQ15007 396 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 AGBL1Q96MI9 1066 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 IL25Q9H293 177 aa14.41□□□□□ -0.1
CBWD3-218ENST00000622755 ADD3Q9UEY8 706 aaKnown RBP14.41□□□□□ -0.1
CBWD3-218ENST00000622755 CENPFP49454 3210 aa14.4□□□□□ -0.1
CBWD3-218ENST00000622755 ASB14A6NK59 587 aa14.4□□□□□ -0.1
CBWD3-218ENST00000622755 SNHG28P0DPA3 235 aa14.4□□□□□ -0.1
CBWD3-218ENST00000622755 AKR1A1P14550 325 aa14.4□□□□□ -0.1
CBWD3-218ENST00000622755 TTBK2Q6IQ55 1244 aa14.4□□□□□ -0.1
CBWD3-218ENST00000622755 NSMFQ6X4W1 530 aa14.4□□□□□ -0.1
CBWD3-218ENST00000622755 SPC25Q9HBM1 224 aa14.4□□□□□ -0.1
CBWD3-218ENST00000622755 FRMPD3Q5JV73 1810 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 DNAJC25-GNG10A0A024R161 153 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 DNM1LO00429 736 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 TMEM67Q5HYA8 995 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 CATIPQ7Z7H3 387 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 RNF180Q86T96 592 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 TMTC2Q8N394 836 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 ABHD16BQ9H3Z7 469 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 ZHX1Q9UKY1 873 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-218ENST00000622755 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 WDR19Q8NEZ3 1342 aa14.39□□□□□ -0.11
CBWD3-218ENST00000622755 PTPDC1A2A3K4 754 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 GOLGA8HP0CJ92 632 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 MCM5P33992 734 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 SNAP25P60880 206 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 LHX8Q68G74 356 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 MAMDC4Q6UXC1 1216 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 NFXL1Q6ZNB6 911 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 RASGRP2Q7LDG7 609 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 UBE2Q1Q7Z7E8 422 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 MTA3Q9BTC8 594 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
CBWD3-218ENST00000622755 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 ZNF536O15090 1300 aa14.38□□□□□ -0.11
CBWD3-218ENST00000622755 PDE4DIPQ5VU43 2346 aa14.37□□□□□ -0.11
CBWD3-218ENST00000622755 PRAMEF19Q5SWL8 479 aa14.37□□□□□ -0.11
CBWD3-218ENST00000622755 MCF2L2Q86YR7 1114 aa14.37□□□□□ -0.11
CBWD3-218ENST00000622755 TMEM87BQ96K49 555 aa14.37□□□□□ -0.11
CBWD3-218ENST00000622755 MAF1Q9H063 256 aa14.37□□□□□ -0.11
CBWD3-218ENST00000622755 XPNPEP3Q9NQH7 507 aa14.37□□□□□ -0.11
CBWD3-218ENST00000622755 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-218ENST00000622755 MYH6P13533 1939 aa14.37□□□□□ -0.11
CBWD3-218ENST00000622755 ABCB11O95342 1321 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 LOC102724159A0A0B4J2E5 919 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms