RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DNM1Q05193 864 aaKnown RBP10.21□□□□□ -0.78
HDAC9-229ENST00000622668 FAM102BQ5T8I3 360 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 FAM173BQ6P4H8 233 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 CCDC65Q8IXS2 484 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 SLC7A3Q8WY07 619 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 FERMT2Q96AC1 680 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 SYNCQ9H7C4 482 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 VCPKMTQ9H867 229 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 LUC7LQ9NQ29 371 aaKnown RBP10.21□□□□□ -0.78
HDAC9-229ENST00000622668 DDX25Q9UHL0 483 aaKnown RBP10.21□□□□□ -0.78
HDAC9-229ENST00000622668 INO80B-WBP1J3KQ70 363 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 COPB2P35606 906 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 TTLL4Q14679 1199 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 HERC4Q5GLZ8 1057 aaPredicted RBP10.21□□□□□ -0.78
HDAC9-229ENST00000622668 ZNF592Q92610 1267 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 ATP6V0A1Q93050 837 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 CAPNS2Q96L46 248 aa10.21□□□□□ -0.78
HDAC9-229ENST00000622668 INO80BQ9C086 356 aaPredicted RBP10.21□□□□□ -0.78
HDAC9-229ENST00000622668 RPAP1Q9BWH6 1393 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-229ENST00000622668 FMN2Q9NZ56 1722 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-229ENST00000622668 RNASELQ05823 741 aaKnown RBP10.2□□□□□ -0.78
HDAC9-229ENST00000622668 ADCK5Q3MIX3 580 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 SPECC1Q5M775 1068 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 RASEFQ8IZ41 740 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 MYCT1Q8N699 235 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 ATG4CQ96DT6 458 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 CAP2P40123 477 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 MMP14P50281 582 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 DYMQ7RTS9 669 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 STAG1Q8WVM7 1258 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 OSBPL3Q9H4L5 887 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 ZNF541Q9H0D2 1346 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 BTBD18B2RXH4 712 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 VIL1P09327 827 aaKnown RBP10.2□□□□□ -0.78
HDAC9-229ENST00000622668 FDX1P10109 184 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 ZSCAN20P17040 1043 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-229ENST00000622668 TBC1D8BQ0IIM8 1120 aa10.2□□□□□ -0.78
HDAC9-229ENST00000622668 MRPS27Q92552 414 aaKnown RBP10.2□□□□□ -0.78
HDAC9-229ENST00000622668 MTIF3Q9H2K0 278 aaKnown RBP10.2□□□□□ -0.78
HDAC9-229ENST00000622668 PNMA6FA0A0J9YX94 578 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 DDTLA6NHG4 134 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 ASB14A6NK59 587 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 PDHXO00330 501 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 TECP42680 631 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 ATN1P54259 1190 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 HSP90AA4PQ58FG1 418 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 C7orf31Q8N865 590 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 KAZALD1Q96I82 304 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 RNF208Q9H0X6 261 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 TSPY26PQ9H489 355 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 RMND1Q9NWS8 449 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 PSMA7O14818 248 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 CHGBP05060 677 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 RARBP10826 455 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 IL1R1P14778 569 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 PSMC4P43686 418 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 GNASQ5JWF2 1037 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 CEP135Q66GS9 1140 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 USP17L6PQ6QN14 398 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 TBC1D10CQ8IV04 446 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 ACER1Q8TDN7 264 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 ZNF274Q96GC6 653 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 RPS6KC1Q96S38 1066 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 LLPHQ9BRT6 129 aaKnown RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 FBXO28Q9NVF7 368 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 TBC1D7Q9P0N9 293 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 CHD2O14647 1828 aaKnown RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 KRT19P08727 400 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 SYT1P21579 422 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 TDRD12Q587J7 1177 aaKnown RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 KIAA1841Q6NSI8 718 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 FILIP1Q7Z7B0 1213 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 FAM83AQ86UY5 434 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 TM6SF1Q9BZW5 370 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 ZBTB5O15062 677 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 TXNP10599 105 aaKnown RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 GCLCP48506 637 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 BAATQ14032 418 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-229ENST00000622668 QRICH1Q2TAL8 776 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 SESTD1Q86VW0 696 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
HDAC9-229ENST00000622668 COL14A1Q05707 1796 aaKnown RBP10.18□□□□□ -0.78
HDAC9-229ENST00000622668 ZMYM6O95789 1325 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 MAP2K1Q02750 393 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-229ENST00000622668 MTERF2Q49AM1 385 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 TTBK2Q6IQ55 1244 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 LRSAM1Q6UWE0 723 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 ERO1AQ96HE7 468 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 GLT1D1Q96MS3 346 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 MTMR4Q9NYA4 1195 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 NFKBIEO00221 500 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 TLR3O15455 904 aaKnown RBP10.18□□□□□ -0.78
HDAC9-229ENST00000622668 F13A1P00488 732 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 CYP2C8P10632 490 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 CRY2Q49AN0 593 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms