RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 LACTBP83111 547 aaPredicted RBP20.3■□□□□ 0.84
SLC6A6-209ENST00000622176 MOV10L1Q9BXT6 1211 aaKnown RBP20.3■□□□□ 0.84
SLC6A6-209ENST00000622176 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
SLC6A6-209ENST00000622176 ST18O60284 1047 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 ADD1P35611 737 aaKnown RBP20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 FUT2Q10981 343 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 RIOX2Q8IUF8 465 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 CPXCR1Q8N123 301 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 SHCBP1Q8NEM2 672 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 RAVER2Q9HCJ3 691 aaKnown RBP20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 VAT1LQ9HCJ6 419 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 PNMA2Q9UL42 364 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 LIMCH1Q9UPQ0 1083 aa20.29■□□□□ 0.84
SLC6A6-209ENST00000622176 DHX16O60231 1041 aaKnown RBP20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 PFKFB2O60825 505 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 SLC25A27O95847 323 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 ICAM1P05362 532 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 CCT2P78371 535 aaKnown RBP20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 PLS1Q14651 629 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 CDC37Q16543 378 aaPredicted RBP20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 CCDC174Q6PII3 467 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 CMTR1Q8N1G2 835 aaKnown RBP20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 ERO1AQ96HE7 468 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 ABHD8Q96I13 439 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 PORCNQ9H237 461 aa20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
SLC6A6-209ENST00000622176 COPB2P35606 906 aa20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 ME3Q16798 604 aa20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 QRICH1Q2TAL8 776 aa20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 SNRNP48Q6IEG0 339 aaKnown RBP20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 NOL8Q76FK4 1167 aaKnown RBP20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 AGBL1Q96MI9 1066 aa20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 SLKQ9H2G2 1235 aaPredicted RBP20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 NCOA5Q9HCD5 579 aaKnown RBP20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 COL11A1P12107 1806 aaPredicted RBP20.27■□□□□ 0.84
SLC6A6-209ENST00000622176 ZBTB5O15062 677 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 ERCC3P19447 782 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 CTGFP29279 349 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 MAPK4P31152 587 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 PSMC4P43686 418 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 FCGRTP55899 365 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 CAP1Q01518 475 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 STK3Q13188 491 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 KIF22Q14807 665 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 NTRK3Q16288 839 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 TKFCQ3LXA3 575 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 CD99L2Q8TCZ2 262 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 PIGSQ96S52 555 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 MROH8Q9H579 483 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 EFCC1Q9HA90 598 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 RIPK3Q9Y572 518 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 CNTNAP5Q8WYK1 1306 aa20.26■□□□□ 0.83
SLC6A6-209ENST00000622176 PNMA6FA0A0J9YX94 578 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 LARGE1O95461 756 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 MCM2P49736 904 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 SCRN1Q12765 414 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 CCAR1Q8IX12 1150 aaKnown RBP20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 CCDC82Q8N4S0 544 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 RRP36Q96EU6 259 aaKnown RBP20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 TRIM47Q96LD4 638 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 ARHGAP39Q9C0H5 1083 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 CCPG1Q9ULG6 757 aa20.25■□□□□ 0.83
SLC6A6-209ENST00000622176 IFNAR1P17181 557 aa20.24■□□□□ 0.83
SLC6A6-209ENST00000622176 ARHGEF6Q15052 776 aa20.24■□□□□ 0.83
SLC6A6-209ENST00000622176 NCAPG2Q86XI2 1143 aa20.24■□□□□ 0.83
SLC6A6-209ENST00000622176 FBXO11Q86XK2 927 aa20.24■□□□□ 0.83
SLC6A6-209ENST00000622176 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
SLC6A6-209ENST00000622176 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
SLC6A6-209ENST00000622176 GTF3C6Q969F1 213 aa20.24■□□□□ 0.83
SLC6A6-209ENST00000622176 TNPO2O14787 897 aaKnown RBP20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 PPP1R11O60927 126 aaPredicted RBP20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 FMNL1O95466 1100 aaPredicted RBP20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 GNRH1P01148 92 aa20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 GPR142Q7Z601 462 aa20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 PLEKHH3Q7Z736 793 aa20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 NECAB1Q8N987 351 aa20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 AMNQ9BXJ7 453 aa20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 SH2B1Q9NRF2 756 aaPredicted RBP20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 FBXO40Q9UH90 709 aa20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 V9GY48 417 aaPredicted RBP20.23■□□□□ 0.83
SLC6A6-209ENST00000622176 CPLX1O14810 134 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 ALAS1P13196 640 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 SLC4A3P48751 1232 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 TRAF1Q13077 416 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 PIBF1Q8WXW3 757 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 TRERF1Q96PN7 1200 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 MCOLN1Q9GZU1 580 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 RNF146Q9NTX7 359 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 SEC63Q9UGP8 760 aaKnown RBP20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 ABCB11O95342 1321 aa20.22■□□□□ 0.83
SLC6A6-209ENST00000622176 PRPF3O43395 683 aaKnown RBP20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 STRNO43815 780 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 ECM2O94769 699 aaPredicted RBP20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 TAL1P17542 331 aaPredicted RBP20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 PTPREP23469 700 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 WDR78Q5VTH9 848 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms