RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TADA3O75528 432 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 RHOBTB3O94955 611 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 CCDC175P0C221 793 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 CDC25AP30304 524 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 PRCPP42785 496 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 CBX1P83916 185 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 TRIM14Q14142 442 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 MFSD14BQ5SR56 506 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 RASGRP2Q7LDG7 609 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 TMC4Q7Z404 712 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 HOMEZQ8IX15 550 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 WDR24Q96S15 920 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 ADGRG1Q9Y653 693 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 ANKRD31Q8N7Z5 1873 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 GREB1LQ9C091 1923 aaPredicted RBP10.64□□□□□ -0.71
PDPN-212ENST00000621990 SOWAHDA6NJG2 315 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 EFCAB8A8MWE9 144 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 hCG_1984214I3L0E3 225 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 COPB1P53618 953 aaKnown RBP10.64□□□□□ -0.71
PDPN-212ENST00000621990 RAD9BQ6WBX8 426 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 IRF2BP1Q8IU81 584 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 ZNF713Q8N859 430 aaPredicted RBP10.64□□□□□ -0.71
PDPN-212ENST00000621990 GIMAP8Q8ND71 665 aaPredicted RBP10.64□□□□□ -0.71
PDPN-212ENST00000621990 CEP95Q96GE4 821 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 SUGT1Q9Y2Z0 365 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 NRXN2Q9P2S2 1712 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 MYH8P13535 1937 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 KCNJ18B7U540 433 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
PDPN-212ENST00000621990 GNA11P29992 359 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 FXR1P51114 621 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDPN-212ENST00000621990 GABPAQ06546 454 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 KCNJ12Q14500 433 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 MTF1Q14872 753 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 RRP36Q96EU6 259 aaKnown RBP10.63□□□□□ -0.71
PDPN-212ENST00000621990 RIOX1Q9H6W3 641 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 MRPL44Q9H9J2 332 aaKnown RBP10.63□□□□□ -0.71
PDPN-212ENST00000621990 C6orf50Q9HD87 102 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 GDAQ9Y2T3 454 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 MRFAP1Q9Y605 127 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 IGKV6D-41A0A0C4DH26 115 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 PP2D1A8MPX8 630 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 POLRMTO00411 1230 aaKnown RBP10.63□□□□□ -0.71
PDPN-212ENST00000621990 OR52Z1P0C646 297 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 SNHG28P0DPA3 235 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 CASQ1P31415 396 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 CASP14P31944 242 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 UBA7P41226 1012 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 NAPAP54920 295 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 GNG11P61952 73 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 DDR1Q08345 913 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 NONOQ15233 471 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDPN-212ENST00000621990 DESI2Q9BSY9 194 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 ZNF446Q9NWS9 450 aa10.63□□□□□ -0.71
PDPN-212ENST00000621990 URI1O94763 535 aaPredicted RBP10.62□□□□□ -0.71
PDPN-212ENST00000621990 EEF1GP26641 437 aaKnown RBP10.62□□□□□ -0.71
PDPN-212ENST00000621990 USP17L2Q6R6M4 530 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 ANKRD20A12PQ8NF67 263 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 THAP9Q9H5L6 903 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 ABHD10Q9NUJ1 306 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 DAGLAQ9Y4D2 1042 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 MYO3BQ8WXR4 1341 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 SMCO2A6NFE2 343 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 N4BP3O15049 544 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 PDHBP11177 359 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 CCT6AP40227 531 aaKnown RBP10.62□□□□□ -0.71
PDPN-212ENST00000621990 COBLL1Q53SF7 1204 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 NEK8Q86SG6 692 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 TMTC1Q8IUR5 882 aa10.62□□□□□ -0.71
PDPN-212ENST00000621990 GTPBP4Q9BZE4 634 aaKnown RBP10.62□□□□□ -0.71
PDPN-212ENST00000621990 SEC63Q9UGP8 760 aaKnown RBP10.62□□□□□ -0.71
PDPN-212ENST00000621990 A0A1W2PQC6 194 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 TPM1P09493 284 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 TTI2Q6NXR4 508 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 SP8Q8IXZ3 490 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 SEPT12Q8IYM1 358 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 ZNF507Q8TCN5 953 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 C7orf25Q9BPX7 421 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 CPVLQ9H3G5 476 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 MTMR4Q9NYA4 1195 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 LGALS16A8MUM7 142 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 COBLO75128 1261 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 PLCG1P19174 1290 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 PMS1P54277 932 aaKnown RBP10.61□□□□□ -0.71
PDPN-212ENST00000621990 TXNRD1Q16881 649 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 ARHGAP29Q52LW3 1261 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 ASPRV1Q53RT3 343 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 UTP14CQ5TAP6 766 aaKnown RBP10.61□□□□□ -0.71
PDPN-212ENST00000621990 CABP7Q86V35 215 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
PDPN-212ENST00000621990 UBXN4Q92575 508 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 DHTKD1Q96HY7 919 aaPredicted RBP10.61□□□□□ -0.71
PDPN-212ENST00000621990 MTMR9Q96QG7 549 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 COA1Q9GZY4 146 aa10.61□□□□□ -0.71
PDPN-212ENST00000621990 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms