RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 BHLHE22Q8NFJ8 381 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-229ENST00000621897 FGD4Q96M96 766 aa7.33□□□□□ -1.24
BRCA1-229ENST00000621897 ZDHHC15Q96MV8 337 aa7.33□□□□□ -1.24
BRCA1-229ENST00000621897 TNFRSF10DQ9UBN6 386 aa7.33□□□□□ -1.24
BRCA1-229ENST00000621897 ARID1BQ8NFD5 2236 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-229ENST00000621897 MYOCOSA0A1B0GUC4 107 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 DBX1A6NMT0 343 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 EPHX1P07099 455 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 IFNGR1P15260 489 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 SDHBP21912 280 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 PDE6BP35913 854 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 PPP2R5DQ14738 602 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 TCEAL1Q15170 157 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 ADGRF1Q5T601 910 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 FCRL3Q96P31 734 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-229ENST00000621897 MCOLN1Q9GZU1 580 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 CAPN10Q9HC96 672 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 SUSD2Q9UGT4 822 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 STRIP2Q9ULQ0 834 aa7.32□□□□□ -1.24
BRCA1-229ENST00000621897 CD3EP07766 207 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 ENDOUP21128 410 aaKnown RBP7.31□□□□□ -1.24
BRCA1-229ENST00000621897 RAP1GAPP47736 663 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 FZD5Q13467 585 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 HEATR6Q6AI08 1181 aaKnown RBP7.31□□□□□ -1.24
BRCA1-229ENST00000621897 KIAA1211LQ6NV74 962 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 JMJD8Q96S16 334 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 PPP1R16BQ96T49 567 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 MCMBPQ9BTE3 642 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 ZNF552Q9H707 407 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-229ENST00000621897 WHRNQ9P202 907 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 MRVI1Q9Y6F6 885 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 TAF6LQ9Y6J9 622 aa7.31□□□□□ -1.24
BRCA1-229ENST00000621897 A0A087WZG4 1122 aa7.3□□□□□ -1.24
BRCA1-229ENST00000621897 ETV2O00321 342 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-229ENST00000621897 FGF10O15520 208 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-229ENST00000621897 GALNT18Q6P9A2 607 aa7.3□□□□□ -1.24
BRCA1-229ENST00000621897 SLC26A8Q96RN1 970 aa7.3□□□□□ -1.24
BRCA1-229ENST00000621897 CRTAC1Q9NQ79 661 aa7.3□□□□□ -1.24
BRCA1-229ENST00000621897 SF3B6Q9Y3B4 125 aaKnown RBP7.3□□□□□ -1.24
BRCA1-229ENST00000621897 A0A1W2PQ45 241 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-229ENST00000621897 A0A1W2PQY0 241 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 OR14I1A6ND48 311 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 PNLIPP16233 465 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 PRKCAP17252 672 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 VHLLQ6RSH7 139 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 ATG14Q6ZNE5 492 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 ZNF513Q8N8E2 541 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-229ENST00000621897 NAT16Q8N8M0 369 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 TINF2Q9BSI4 451 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 IMPACTQ9P2X3 320 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 APEX2Q9UBZ4 518 aa7.29□□□□□ -1.24
BRCA1-229ENST00000621897 DIS3Q9Y2L1 958 aaKnown RBP7.29□□□□□ -1.24
BRCA1-229ENST00000621897 WTIPA6NIX2 430 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-229ENST00000621897 NFIBO00712 420 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
BRCA1-229ENST00000621897 VAMP4O75379 141 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 TMEM253P0C7T8 217 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 MSL3P1P0C860 447 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 MED14OSP0DP75 135 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 POU4F1Q01851 419 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 ADAT2Q7Z6V5 191 aaKnown RBP7.28□□□□□ -1.24
BRCA1-229ENST00000621897 NUP43Q8NFH3 380 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 KCNN1Q92952 543 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 SGPP1Q9BX95 441 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 GBP3Q9H0R5 595 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 CD320Q9NPF0 282 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
BRCA1-229ENST00000621897 CGGBP1Q9UFW8 167 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-229ENST00000621897 STXBP3O00186 592 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 PEX10O60683 326 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 GLDCP23378 1020 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 NOP2P46087 812 aaKnown RBP7.27□□□□□ -1.25
BRCA1-229ENST00000621897 ERVFRD-1P60508 538 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 DPY19L1Q2PZI1 675 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 C1QL4Q86Z23 238 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 ARHGEF39Q8N4T4 335 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 PTCHD1Q96NR3 888 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 GCM1Q9NP62 436 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 ACSL6Q9UKU0 697 aa7.27□□□□□ -1.25
BRCA1-229ENST00000621897 BTBD11A6QL63 1104 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 PPM1BO75688 479 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 SSBP05455 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
BRCA1-229ENST00000621897 FGRP09769 529 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 CFPP27918 469 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 ETFBP38117 255 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 MVKQ03426 396 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 TNFRSF12AQ9NP84 129 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 IGSF5Q9NSI5 407 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 SUGT1Q9Y2Z0 365 aa7.26□□□□□ -1.25
BRCA1-229ENST00000621897 B2RBV5 119 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 AURKAO14965 403 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 DLG4P78352 724 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 CYP4F8P98187 520 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 KCNA10Q16322 511 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 HLA-DQA1Q5Y7H0 255 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 CYP2R1Q6VVX0 501 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 ANKLE2Q86XL3 938 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 VPS37DQ86XT2 251 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 RCC1LQ96I51 464 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms