RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 CCZ1BP86790 482 aa28.83■■■□□ 2.21
VEGFC-202ENST00000618562 CCZ1P86791 482 aaPredicted RBP28.83■■■□□ 2.21
VEGFC-202ENST00000618562 C16orf45Q96MC5 204 aaPredicted RBP28.83■■■□□ 2.21
VEGFC-202ENST00000618562 HERC5Q9UII4 1024 aaKnown RBP28.83■■■□□ 2.21
VEGFC-202ENST00000618562 HOOK1Q9UJC3 728 aaKnown RBP28.83■■■□□ 2.21
VEGFC-202ENST00000618562 RIOK3O14730 519 aaKnown RBP28.82■■■□□ 2.2
VEGFC-202ENST00000618562 ARID5BQ14865 1188 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 TTC38Q5R3I4 469 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 GALNT17Q6IS24 598 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 ZNF579Q8NAF0 562 aaKnown RBP28.82■■■□□ 2.2
VEGFC-202ENST00000618562 CNNM3Q8NE01 707 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 XPO4Q9C0E2 1151 aaKnown RBP28.82■■■□□ 2.2
VEGFC-202ENST00000618562 KCND1Q9NSA2 647 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 WNT10BO00744 389 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 ICA1Q05084 483 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 PNOCQ13519 176 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 TPD52L1Q16890 204 aaPredicted RBP28.82■■■□□ 2.2
VEGFC-202ENST00000618562 NBPF9Q3BBW0 867 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 RASGRP4Q8TDF6 673 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 MYOZ2Q9NPC6 264 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 IFNKQ9P0W0 207 aa28.82■■■□□ 2.2
VEGFC-202ENST00000618562 SRPRBQ9Y5M8 271 aaKnown RBP28.82■■■□□ 2.2
VEGFC-202ENST00000618562 MYO1BO43795 1136 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 LONRF3Q496Y0 759 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 ZMYND12Q9H0C1 365 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.81■■■□□ 2.2
VEGFC-202ENST00000618562 SMC2O95347 1197 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 TNNT1P13805 278 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 TRAPPC10P48553 1259 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 NAPAP54920 295 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 GPATCH4Q5T3I0 446 aaKnown RBP28.81■■■□□ 2.2
VEGFC-202ENST00000618562 TTBK2Q6IQ55 1244 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 CCDC150Q8NCX0 1101 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 PCDHA6Q9UN73 950 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 PCDHA8Q9Y5H6 950 aa28.81■■■□□ 2.2
VEGFC-202ENST00000618562 GH2P01242 217 aa28.8■■■□□ 2.2
VEGFC-202ENST00000618562 MYL5Q02045 173 aa28.8■■■□□ 2.2
VEGFC-202ENST00000618562 ZNF174Q15697 407 aa28.8■■■□□ 2.2
VEGFC-202ENST00000618562 CDAN1Q8IWY9 1227 aa28.8■■■□□ 2.2
VEGFC-202ENST00000618562 PAXBP1Q9Y5B6 917 aa28.8■■■□□ 2.2
VEGFC-202ENST00000618562 CCDC96Q2M329 555 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 SPECC1Q5M775 1068 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 RBM26Q5T8P6 1007 aaKnown RBP28.79■■■□□ 2.2
VEGFC-202ENST00000618562 KCTD1Q719H9 257 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 FAM83AQ86UY5 434 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 CCDC12Q8WUD4 166 aaPredicted RBP28.79■■■□□ 2.2
VEGFC-202ENST00000618562 TMEM39BQ9GZU3 492 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 BMP15O95972 392 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 ZNF280AP59817 542 aaPredicted RBP28.79■■■□□ 2.2
VEGFC-202ENST00000618562 ADGRF4Q8IZF3 695 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 JMJD4Q9H9V9 463 aa28.79■■■□□ 2.2
VEGFC-202ENST00000618562 CTIFO43310 598 aaKnown RBP28.78■■■□□ 2.2
VEGFC-202ENST00000618562 RPS12P25398 132 aaKnown RBP28.78■■■□□ 2.2
VEGFC-202ENST00000618562 MDM2Q00987 491 aaPredicted RBP28.78■■■□□ 2.2
VEGFC-202ENST00000618562 HSD3B7Q9H2F3 369 aa28.78■■■□□ 2.2
VEGFC-202ENST00000618562 FZD9O00144 591 aa28.77■■■□□ 2.2
VEGFC-202ENST00000618562 EGFRP00533 1210 aa28.77■■■□□ 2.2
VEGFC-202ENST00000618562 SLC16A2P36021 539 aa28.77■■■□□ 2.2
VEGFC-202ENST00000618562 FANCCQ00597 558 aa28.77■■■□□ 2.2
VEGFC-202ENST00000618562 PGAP2Q9UHJ9 254 aa28.77■■■□□ 2.2
VEGFC-202ENST00000618562 SMCO2A6NFE2 343 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 hCG_1984214I3L0E3 225 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 GLIPR1L2Q4G1C9 344 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 SLFN13Q68D06 897 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 ZNF713Q8N859 430 aaPredicted RBP28.76■■■□□ 2.19
VEGFC-202ENST00000618562 DCAF4Q8WV16 495 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 PCDHA5Q9Y5H7 936 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 CCDC194A0A1B0GVG4 234 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 LMOD1P29536 600 aaPredicted RBP28.76■■■□□ 2.19
VEGFC-202ENST00000618562 ATP2C1P98194 919 aaPredicted RBP28.76■■■□□ 2.19
VEGFC-202ENST00000618562 ISM2Q6H9L7 571 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 TMC6Q7Z403 805 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 CSRNP2Q9H175 543 aa28.76■■■□□ 2.19
VEGFC-202ENST00000618562 CBFA2T2O43439 604 aa28.75■■■□□ 2.19
VEGFC-202ENST00000618562 RAD21O60216 631 aa28.75■■■□□ 2.19
VEGFC-202ENST00000618562 MMP14P50281 582 aa28.75■■■□□ 2.19
VEGFC-202ENST00000618562 PTGDRQ13258 359 aa28.75■■■□□ 2.19
VEGFC-202ENST00000618562 C6orf50Q9HD87 102 aa28.75■■■□□ 2.19
VEGFC-202ENST00000618562 ESYT2A0FGR8 921 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 SLC1A4P43007 532 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 KCNJ6P48051 423 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 NT5DC1Q5TFE4 455 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 NYAP1Q6ZVC0 841 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 ZNF710Q8N1W2 664 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 GMCL1P1Q8NEA9 526 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 MTMR8Q96EF0 704 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 PNMA6FA0A0J9YX94 578 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 GNA11P29992 359 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 MCM7P33993 719 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 GMPSP49915 693 aaPredicted RBP28.74■■■□□ 2.19
VEGFC-202ENST00000618562 POSTNQ15063 836 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 KANK3Q6NY19 840 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 COA7Q96BR5 231 aa28.74■■■□□ 2.19
VEGFC-202ENST00000618562 USP17L10C9JJH3 530 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 F5H6K3 240 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 TBC1D12O60347 775 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 PPP1R11O60927 126 aaPredicted RBP28.73■■■□□ 2.19
VEGFC-202ENST00000618562 KLRC3Q07444 240 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 FERMT2Q96AC1 680 aa28.73■■■□□ 2.19
VEGFC-202ENST00000618562 NRDCO43847 1150 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms