RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CALM1P0DP23 149 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 CALM2P0DP24 149 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 CALM3P0DP25 149 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 S100A5P33763 92 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 MAP3K10Q02779 954 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 GDAP1Q8TB36 358 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 EHD2Q9NZN4 543 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 IFNB1P01574 187 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
COL5A1-208ENST00000618395 HDAC11Q96DB2 347 aa16.36■□□□□ 0.21
COL5A1-208ENST00000618395 PRR23D1E9PI22 279 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 PRR23D2P0DMB1 279 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 CREB3L3Q68CJ9 461 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 NCAPH2Q6IBW4 605 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 MAPK8IP1Q9UQF2 711 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 GNA11P29992 359 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 ADCK1Q86TW2 530 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 FMO2Q99518 471 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 HLA-DPA1P20036 260 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 BEND6Q5SZJ8 279 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 TTI1O43156 1089 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 GNA14O95837 355 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 ADCY2Q08462 1091 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 STX3Q13277 289 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 CDKL2Q92772 493 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 TAB2Q9NYJ8 693 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 SYT2Q8N9I0 419 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 SYBUQ9NX95 663 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 BIRC3Q13489 604 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 EMBQ6PCB8 327 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 PCDHB15Q9Y5E8 787 aa16.35■□□□□ 0.21
COL5A1-208ENST00000618395 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 TMA7Q9Y2S6 64 aaKnown RBP16.35■□□□□ 0.21
COL5A1-208ENST00000618395 KCNA3P22001 575 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 PTPRGP23470 1445 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 LRRC9Q6ZRR7 1453 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 TEDDM1Q5T9Z0 273 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 RGS9BPQ6ZS82 235 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 DHX32Q7L7V1 743 aaKnown RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 TRPV6Q9H1D0 765 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 USTQ9Y2C2 406 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 ZNF189O75820 626 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 NUGGCQ68CJ6 796 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 PRPF38AQ8NAV1 312 aaKnown RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 EPN1Q9Y6I3 576 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 GMNCA6NCL1 334 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 MDM2Q00987 491 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 CCDC85AQ96PX6 553 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 ELAC2Q9BQ52 826 aaKnown RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 PITPNM3Q9BZ71 974 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 CARD9Q9H257 536 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 KIAA1468Q9P260 1216 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 ZMYND10O75800 440 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 WDR47O94967 919 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 TMEM154Q6P9G4 183 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 ST13P5Q8NFI4 369 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 SEC24BO95487 1268 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 FBXL13Q8NEE6 735 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 ETAA1Q9NY74 926 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
COL5A1-208ENST00000618395 XPOTO43592 962 aaKnown RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 NCF2P19878 526 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
COL5A1-208ENST00000618395 PODNQ7Z5L7 613 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 CEP85Q6P2H3 762 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 RAPGEF5Q92565 580 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 FNBP1Q96RU3 617 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 SIKE1Q9BRV8 207 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 ECT2Q9H8V3 914 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 ATP6V0A4Q9HBG4 840 aa16.33■□□□□ 0.21
COL5A1-208ENST00000618395 TPP2P29144 1249 aaPredicted RBP16.33■□□□□ 0.2
COL5A1-208ENST00000618395 CUL1Q13616 776 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 SLC38A10Q9HBR0 1119 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 SPDYE3A6NKU9 549 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 EIF4E1BA6NMX2 242 aaKnown RBP16.33■□□□□ 0.2
COL5A1-208ENST00000618395 BAG3O95817 575 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 SMTNP53814 917 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 ST5P78524 1137 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 TRIM16LQ309B1 348 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 TRIM63Q969Q1 353 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 GOLGA4Q13439 2230 aaKnown RBP16.33■□□□□ 0.2
COL5A1-208ENST00000618395 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
COL5A1-208ENST00000618395 STARD3NLO95772 234 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 NAIF1Q69YI7 327 aaPredicted RBP16.33■□□□□ 0.2
COL5A1-208ENST00000618395 SMYD3Q9H7B4 428 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 RASSF3Q86WH2 238 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
COL5A1-208ENST00000618395 PDE5AO76074 875 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 C4BPBP20851 252 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 FBXW10Q5XX13 1052 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms