RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 RIN2Q8WYP3 895 aaPredicted RBP17.42■□□□□ 0.38
GPN1-212ENST00000616939 PAGR1Q9BTK6 254 aa17.42■□□□□ 0.38
GPN1-212ENST00000616939 EXOC1Q9NV70 894 aa17.42■□□□□ 0.38
GPN1-212ENST00000616939 MAGEC2Q9UBF1 373 aaPredicted RBP17.42■□□□□ 0.38
GPN1-212ENST00000616939 GDAQ9Y2T3 454 aa17.42■□□□□ 0.38
GPN1-212ENST00000616939 IRS4O14654 1257 aaPredicted RBP17.41■□□□□ 0.38
GPN1-212ENST00000616939 ZEB2O60315 1214 aa17.41■□□□□ 0.38
GPN1-212ENST00000616939 SRGAP2O75044 1071 aa17.41■□□□□ 0.38
GPN1-212ENST00000616939 PPP1R2P41236 205 aa17.41■□□□□ 0.38
GPN1-212ENST00000616939 APBA1Q02410 837 aa17.41■□□□□ 0.38
GPN1-212ENST00000616939 CCDC155Q8N6L0 562 aa17.41■□□□□ 0.38
GPN1-212ENST00000616939 ENAHQ8N8S7 591 aaPredicted RBP17.41■□□□□ 0.38
GPN1-212ENST00000616939 STAMQ92783 540 aa17.41■□□□□ 0.38
GPN1-212ENST00000616939 SECISBP2LQ93073 1101 aaKnown RBP17.41■□□□□ 0.38
GPN1-212ENST00000616939 DHTKD1Q96HY7 919 aaPredicted RBP17.41■□□□□ 0.38
GPN1-212ENST00000616939 CAPZA3Q96KX2 299 aa17.41■□□□□ 0.38
GPN1-212ENST00000616939 ZSCAN10Q96SZ4 725 aaPredicted RBP17.41■□□□□ 0.38
GPN1-212ENST00000616939 MYCBPQ99417 103 aaPredicted RBP17.41■□□□□ 0.38
GPN1-212ENST00000616939 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
GPN1-212ENST00000616939 PSMA7O14818 248 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 RHOBTB3O94955 611 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 FGRP09769 529 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 IDEP14735 1019 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 HNRNPH3P31942 346 aaKnown RBP17.4■□□□□ 0.38
GPN1-212ENST00000616939 CCT5P48643 541 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 IL17AQ16552 155 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 TTI2Q6NXR4 508 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 CREG2Q8IUH2 290 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 FAM114A1Q8IWE2 563 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 LACRTQ9GZZ8 138 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 PLEKHA4Q9H4M7 779 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 NHEJ1Q9H9Q4 299 aaPredicted RBP17.4■□□□□ 0.38
GPN1-212ENST00000616939 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 ITGB4P16144 1822 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 KLRC4O43908 158 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 TACC1O75410 805 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 TCP1P17987 556 aaKnown RBP17.4■□□□□ 0.38
GPN1-212ENST00000616939 KIF5AQ12840 1032 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 B4GALNT4Q76KP1 1039 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 CNPY4Q8N129 248 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 GIMAP8Q8ND71 665 aaPredicted RBP17.4■□□□□ 0.38
GPN1-212ENST00000616939 ERGIC2Q96RQ1 377 aa17.4■□□□□ 0.38
GPN1-212ENST00000616939 V9GY48 417 aaPredicted RBP17.4■□□□□ 0.38
GPN1-212ENST00000616939 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.37
GPN1-212ENST00000616939 CACNA1SQ13698 1873 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.37
GPN1-212ENST00000616939 RCCD1A6NED2 376 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 SRRM3A6NNA2 597 aaPredicted RBP17.39■□□□□ 0.37
GPN1-212ENST00000616939 USO1O60763 962 aaKnown RBP17.39■□□□□ 0.37
GPN1-212ENST00000616939 COBLO75128 1261 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 PRDM1O75626 825 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 PLEKHA8P1O95397 391 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 LCA5LO95447 670 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 STAT6P42226 847 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 C2orf54Q08AI8 447 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 TROAPQ12815 778 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 GLE1Q53GS7 698 aaKnown RBP17.39■□□□□ 0.37
GPN1-212ENST00000616939 SND1Q7KZF4 910 aaKnown RBP eCLIP17.39■□□□□ 0.37
GPN1-212ENST00000616939 CCDC91Q7Z6B0 441 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 PROSER2Q86WR7 435 aaPredicted RBP17.39■□□□□ 0.37
GPN1-212ENST00000616939 C1orf131Q8NDD1 294 aaKnown RBP17.39■□□□□ 0.37
GPN1-212ENST00000616939 DISC1Q9NRI5 854 aa17.39■□□□□ 0.37
GPN1-212ENST00000616939 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
GPN1-212ENST00000616939 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
GPN1-212ENST00000616939 GNGT1P63211 74 aa17.38■□□□□ 0.37
GPN1-212ENST00000616939 COBLL1Q53SF7 1204 aa17.38■□□□□ 0.37
GPN1-212ENST00000616939 IFIT1BQ5T764 474 aaKnown RBP17.38■□□□□ 0.37
GPN1-212ENST00000616939 ZSCAN29Q8IWY8 852 aaPredicted RBP17.38■□□□□ 0.37
GPN1-212ENST00000616939 GSPT2Q8IYD1 628 aaKnown RBP17.38■□□□□ 0.37
GPN1-212ENST00000616939 TRIM47Q96LD4 638 aa17.38■□□□□ 0.37
GPN1-212ENST00000616939 CUEDC2Q9H467 287 aa17.38■□□□□ 0.37
GPN1-212ENST00000616939 HYOU1Q9Y4L1 999 aa17.38■□□□□ 0.37
GPN1-212ENST00000616939 BICDL2A1A5D9 508 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 TRIM49BA6NDI0 452 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 CALML3P27482 149 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 SYNE4Q8N205 404 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 BCAS4Q8TDM0 211 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 DRC1Q96MC2 740 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 SH2D4AQ9H788 454 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
GPN1-212ENST00000616939 ANKRD65E5RJM6 399 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 STARD3NLO95772 234 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 SCG2P13521 617 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 CCNE1P24864 410 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 INPP5BP32019 993 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 GSCP56915 257 aaPredicted RBP17.37■□□□□ 0.37
GPN1-212ENST00000616939 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 ANKRD18AQ8IVF6 992 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 KAT2BQ92831 832 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 DUSP9Q99956 384 aaKnown RBP17.37■□□□□ 0.37
GPN1-212ENST00000616939 TUBGCP2Q9BSJ2 902 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 CCSER1Q9C0I3 900 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
GPN1-212ENST00000616939 MYH10P35580 1976 aa17.36■□□□□ 0.37
GPN1-212ENST00000616939 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms