RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 PDE4BQ07343 736 aa6.39□□□□□ -1.39
NEAT1-205ENST00000616315 DBX2Q6ZNG2 339 aa6.39□□□□□ -1.39
NEAT1-205ENST00000616315 LSRQ86X29 649 aaPredicted RBP6.39□□□□□ -1.39
NEAT1-205ENST00000616315 FAM169BQ8N8A8 192 aa6.39□□□□□ -1.39
NEAT1-205ENST00000616315 RBBP8NLQ8NC74 664 aaPredicted RBP6.39□□□□□ -1.39
NEAT1-205ENST00000616315 CYB5D2Q8WUJ1 264 aa6.39□□□□□ -1.39
NEAT1-205ENST00000616315 DACT3Q96B18 629 aaPredicted RBP6.39□□□□□ -1.39
NEAT1-205ENST00000616315 PUS7Q96PZ0 661 aaKnown RBP6.39□□□□□ -1.39
NEAT1-205ENST00000616315 EPB41L4AQ9HCS5 686 aaPredicted RBP6.39□□□□□ -1.39
NEAT1-205ENST00000616315 ACTR10Q9NZ32 417 aa6.39□□□□□ -1.39
NEAT1-205ENST00000616315 RFXAPO00287 272 aa6.38□□□□□ -1.39
NEAT1-205ENST00000616315 EPHB3P54753 998 aa6.38□□□□□ -1.39
NEAT1-205ENST00000616315 SDE2Q6IQ49 451 aa6.38□□□□□ -1.39
NEAT1-205ENST00000616315 NLRX1Q86UT6 975 aa6.38□□□□□ -1.39
NEAT1-205ENST00000616315 TMEM151BQ8IW70 566 aa6.38□□□□□ -1.39
NEAT1-205ENST00000616315 ANKS4BQ8N8V4 417 aa6.38□□□□□ -1.39
NEAT1-205ENST00000616315 RNF141Q8WVD5 230 aa6.38□□□□□ -1.39
NEAT1-205ENST00000616315 SRPK1Q96SB4 655 aaKnown RBP6.38□□□□□ -1.39
NEAT1-205ENST00000616315 PRR36Q9H6K5 1346 aa6.37□□□□□ -1.39
NEAT1-205ENST00000616315 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
NEAT1-205ENST00000616315 VMACQ2NL98 169 aa6.37□□□□□ -1.39
NEAT1-205ENST00000616315 JAZF1Q86VZ6 243 aa6.37□□□□□ -1.39
NEAT1-205ENST00000616315 FEZF2Q8TBJ5 459 aa6.37□□□□□ -1.39
NEAT1-205ENST00000616315 SIGLEC10Q96LC7 697 aa6.37□□□□□ -1.39
NEAT1-205ENST00000616315 DEPDC7Q96QD5 511 aa6.37□□□□□ -1.39
NEAT1-205ENST00000616315 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
NEAT1-205ENST00000616315 OR14I1A6ND48 311 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 MEIS3P2A8K0S8 358 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 HTR3BO95264 441 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 HMGB1P09429 215 aaKnown RBP6.36□□□□□ -1.39
NEAT1-205ENST00000616315 DUSP4Q13115 394 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 MLECQ14165 292 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 RASA3Q14644 834 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 DDR2Q16832 855 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 LRRFIP1Q32MZ4 808 aaKnown RBP6.36□□□□□ -1.39
NEAT1-205ENST00000616315 ADGRF1Q5T601 910 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 LRP10Q7Z4F1 713 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 PRRT2Q7Z6L0 340 aaPredicted RBP6.36□□□□□ -1.39
NEAT1-205ENST00000616315 NLGN1Q8N2Q7 840 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 C19orf47Q8N9M1 422 aaKnown RBP6.36□□□□□ -1.39
NEAT1-205ENST00000616315 FAM13CQ8NE31 585 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 SYTL4Q96C24 671 aaPredicted RBP6.36□□□□□ -1.39
NEAT1-205ENST00000616315 IRAK3Q9Y616 596 aa6.36□□□□□ -1.39
NEAT1-205ENST00000616315 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
NEAT1-205ENST00000616315 PLCG1P19174 1290 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 AFF3P51826 1226 aaKnown RBP6.35□□□□□ -1.39
NEAT1-205ENST00000616315 CASP7P55210 303 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 CELF2-AS1Q8N7Q2 184 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 TM9SF2Q99805 663 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 CNTD2Q9H8S5 307 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 MSRB2Q9Y3D2 182 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
NEAT1-205ENST00000616315 CCDC85CA6NKD9 419 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 USP2O75604 605 aaPredicted RBP6.34□□□□□ -1.39
NEAT1-205ENST00000616315 SASH1O94885 1247 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 SDHBP21912 280 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 VIPR1P32241 457 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 PPP2R5EQ16537 467 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 FXNQ16595 210 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 LARP1BQ659C4 914 aaKnown RBP6.34□□□□□ -1.39
NEAT1-205ENST00000616315 ZDHHC14Q8IZN3 488 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 KREMEN1Q96MU8 473 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 GMIPQ9P107 970 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 REV1Q9UBZ9 1251 aa6.34□□□□□ -1.39
NEAT1-205ENST00000616315 MRPL42Q9Y6G3 142 aaKnown RBP6.34□□□□□ -1.39
NEAT1-205ENST00000616315 N4BP3O15049 544 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 NCLP19338 710 aaKnown RBP6.33□□□□□ -1.4
NEAT1-205ENST00000616315 GUCY2CP25092 1073 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 TMEM201Q5SNT2 666 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 OVOS1Q6IE37 1185 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 RUFY4Q6ZNE9 571 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 TMEFF1Q8IYR6 380 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
NEAT1-205ENST00000616315 USHBP1Q8N6Y0 703 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 CCDC113Q9H0I3 377 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 ANTXR1Q9H6X2 564 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 ST7Q9NRC1 585 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
NEAT1-205ENST00000616315 FAM221BA6H8Z2 402 aa6.32□□□□□ -1.4
NEAT1-205ENST00000616315 ANKRD62A6NC57 917 aa6.32□□□□□ -1.4
NEAT1-205ENST00000616315 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
NEAT1-205ENST00000616315 HRKO00198 91 aa6.32□□□□□ -1.4
NEAT1-205ENST00000616315 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
NEAT1-205ENST00000616315 CELA3BP08861 270 aa6.32□□□□□ -1.4
NEAT1-205ENST00000616315 RPL10P27635 214 aaKnown RBP6.32□□□□□ -1.4
NEAT1-205ENST00000616315 YARSP54577 528 aaKnown RBP6.32□□□□□ -1.4
NEAT1-205ENST00000616315 SLFN12Q8IYM2 578 aa6.32□□□□□ -1.4
NEAT1-205ENST00000616315 VWCEQ96DN2 955 aa6.32□□□□□ -1.4
NEAT1-205ENST00000616315 A0A1W2PQH9 124 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 PDPK1O15530 556 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 NRDCO43847 1150 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 CDR1P51861 262 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 IFRD2Q12894 506 aaPredicted RBP6.31□□□□□ -1.4
NEAT1-205ENST00000616315 RASGRF1Q13972 1273 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 CLEC16AQ2KHT3 1053 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 EGFLAMQ63HQ2 1017 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 NLRC3Q7RTR2 1065 aa6.31□□□□□ -1.4
NEAT1-205ENST00000616315 CRTAC1Q9NQ79 661 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms