RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 PHF24Q9UPV7 400 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 RIPK3Q9Y572 518 aa14.37□□□□□ -0.11
PDLIM2-218ENST00000614502 TRIM43BA6NCK2 446 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 TRIM6-TRIM34B2RNG4 842 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 ORC4O43929 436 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 RCSD1Q6JBY9 416 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 CCDC129Q6ZRS4 1044 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 NUP133Q8WUM0 1156 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 BADQ92934 168 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 TRIM43Q96BQ3 446 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 LENG1Q96BZ8 264 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 SPC25Q9HBM1 224 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 PDLIM7Q9NR12 457 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 VCANP13611 3396 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
PDLIM2-218ENST00000614502 MOXD2PA6NHM9 499 aa14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 DUSP11O75319 330 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 TAL1P17542 331 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 NT5C2P49902 561 aa14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 FAM109BQ6ICB4 259 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 DCAF4Q8WV16 495 aa14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 TACC3Q9Y6A5 838 aa14.35□□□□□ -0.11
PDLIM2-218ENST00000614502 ASB14A6NK59 587 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 SNAI1O95863 264 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 PGK1P00558 417 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 FGRP09769 529 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 MCCP23508 829 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 ITGB8P26012 769 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 SMC5Q8IY18 1101 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 PCSK9Q8NBP7 692 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 LNPKQ9C0E8 428 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 TCP11L1Q9NUJ3 509 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 MYO9BQ13459 2157 aa14.34□□□□□ -0.11
PDLIM2-218ENST00000614502 FOXP2O15409 715 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 ADAMTS4O75173 837 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 FGAP02671 866 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 HSPD1P10809 573 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 NOVP48745 357 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 TLE2Q04725 743 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 ZNF697Q5TEC3 545 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 OSBPL3Q9H4L5 887 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 IL17RBQ9NRM6 502 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 RNF146Q9NTX7 359 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 MROH7Q68CQ1 1323 aa14.33□□□□□ -0.12
PDLIM2-218ENST00000614502 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 A0A1W2PQ45 241 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 A0A1W2PQY0 241 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 HIP1O00291 1037 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 IGHDP01880 384 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 CLTBP09497 229 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 TOP1P11387 765 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 CST5P28325 142 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 ACLYP53396 1101 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 EPHB4P54760 987 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 CCDC96Q2M329 555 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 MFSD6Q6ZSS7 791 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 KCTD1Q719H9 257 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 ARMCX2Q7L311 632 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 CHD1LQ86WJ1 897 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 KLHDC9Q8NEP7 349 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 GLT1D1Q96MS3 346 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 TTC14Q96N46 770 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 CDX2Q99626 313 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 STARD7Q9NQZ5 370 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 CCDC171Q6TFL3 1326 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 SYNRGQ9UMZ2 1314 aa14.32□□□□□ -0.12
PDLIM2-218ENST00000614502 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 DCDC2CA8MYV0 355 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 ALAS1P13196 640 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 CCDC144BQ3MJ40 725 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 CCDC178Q5BJE1 867 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 AGBL1Q96MI9 1066 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 TTYH1Q9H313 450 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 A1CFQ9NQ94 594 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 PRR12Q9ULL5 1215 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 ZNF536O15090 1300 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 ELP1O95163 1332 aa14.31□□□□□ -0.12
PDLIM2-218ENST00000614502 LOC102724159A0A0B4J2E5 919 aa14.3□□□□□ -0.12
PDLIM2-218ENST00000614502 NMT2O60551 498 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms