RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 GJC2Q5T442 439 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 TRMT44Q8IYL2 757 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 CTCFLQ8NI51 663 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 N4BP2L2Q92802 583 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 UTP14AQ9BVJ6 771 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.54□□□□□ -1.24e-7■■□□□ 14.1
CDKAL1-204ENST00000613575 PUS7LQ9H0K6 701 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 GREM2Q9H772 168 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 THRAP3Q9Y2W1 955 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 PTPDC1A2A3K4 754 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 GOLGA6L4A6NEF3 574 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 AP5Z1O43299 807 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 CCDC175P0C221 793 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 TPP2P29144 1249 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 MCAMP43121 646 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 RAB15P59190 212 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 TYRO3Q06418 890 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 TSNAXIP1Q2TAA8 658 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 METTL24Q5JXM2 366 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 C16orf87Q6PH81 154 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 SDCCAG8Q86SQ7 713 aaPredicted RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 ENGASEQ8NFI3 743 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 NCOA7Q8NI08 942 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 LPIN2Q92539 896 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 LRRC2Q9BYS8 371 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 TNMDQ9H2S6 317 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 UNC45AQ9H3U1 944 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 RTEL1Q9NZ71 1219 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 CDV3Q9UKY7 258 aaKnown RBP7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 MYO6Q9UM54 1294 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 ZBTB1Q9Y2K1 713 aa7.54□□□□□ -1.2
CDKAL1-204ENST00000613575 A0A1W2PQ27 194 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 A0A1W2PQ64 194 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 A0A1W2PQD8 194 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 TCRBV5S4A2TA0A5A2 114 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 ZNF213O14771 459 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 GPAA1O43292 621 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 MARCH6O60337 910 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 GCKP35557 465 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 CDR1P51861 262 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 ANTXR2P58335 489 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 SNW1Q13573 536 aaKnown RBP7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 CCDC102BQ68D86 513 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 INTS5Q6P9B9 1019 aaKnown RBP7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 SPATA21Q7Z572 469 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 ANKRD13AQ8IZ07 590 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 GLMNQ92990 594 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 SMARCE1Q969G3 411 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 MRFAP1L1Q96HT8 127 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 ST7Q9NRC1 585 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 TRMT112Q9UI30 125 aaKnown RBP7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 TJP1Q07157 1748 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 LRP6O75581 1613 aa7.53□□□□□ -1.2
CDKAL1-204ENST00000613575 ZMYM6O95789 1325 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 SHANK3Q9BYB0 1731 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 ZSCAN9O15535 394 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PRC1O43663 620 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 ERLIN1O75477 346 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 GJA8P48165 433 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 TRPC1P48995 793 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 CCNHP51946 323 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PRR20EP86478 221 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PRR20CP86479 221 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PRR20DP86480 221 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PRR20BP86481 221 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PRR20AP86496 221 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 DEUP1Q05D60 604 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 DDR1Q08345 913 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PRPF4BQ13523 1007 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PUM3Q15397 648 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PARP10Q53GL7 1025 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 SLC9C2Q5TAH2 1124 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 ADALQ6DHV7 355 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 FBXO38Q6PIJ6 1188 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 CDK15Q96Q40 435 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 USP28Q96RU2 1077 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 STRBPQ96SI9 672 aaKnown RBP7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 ALG2Q9H553 416 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 INCENPQ9NQS7 918 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 CNNM1Q9NRU3 951 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 PPME1Q9Y570 386 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 RIC1Q4ADV7 1423 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
CDKAL1-204ENST00000613575 AFDNP55196 1824 aaKnown RBP7.51□□□□□ -1.21
CDKAL1-204ENST00000613575 J3QL48 77 aa7.51□□□□□ -1.21
CDKAL1-204ENST00000613575 ERLIN2O94905 339 aa7.51□□□□□ -1.21
CDKAL1-204ENST00000613575 KIF4AO95239 1232 aa7.51□□□□□ -1.21
CDKAL1-204ENST00000613575 YEATS4O95619 227 aa7.51□□□□□ -1.21
CDKAL1-204ENST00000613575 PNMA6AP0CW24 399 aaPredicted RBP7.51□□□□□ -1.21
CDKAL1-204ENST00000613575 FSHRP23945 695 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms