RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PRMT6Q96LA8 375 aaPredicted RBP12.12□□□□□ -0.47
FAM3A-221ENST00000612856 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 ELP3Q9H9T3 547 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 CDHR2Q9BYE9 1310 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 MACROD2A1Z1Q3 448 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 AKR1B1P15121 316 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 HMGCS2P54868 508 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 CACNA2D4Q7Z3S7 1137 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 TMC4Q7Z404 712 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 CCDC91Q7Z6B0 441 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
FAM3A-221ENST00000612856 ZNF446Q9NWS9 450 aa12.12□□□□□ -0.47
FAM3A-221ENST00000612856 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
FAM3A-221ENST00000612856 CLGNO14967 610 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 MAP2K2P36507 400 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 TECP42680 631 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 GOLGA5Q8TBA6 731 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 PPP1R13BQ96KQ4 1090 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 EXOC1Q9NV70 894 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 TTC38Q5R3I4 469 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 METTL13Q8N6R0 699 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 PCDHAC2Q9Y5I4 1007 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 GSG1L2A8MUP6 293 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 CSF1RP07333 972 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 UBASH3AP57075 661 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 ETF1P62495 437 aaKnown RBP12.11□□□□□ -0.47
FAM3A-221ENST00000612856 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 SNX29Q8TEQ0 813 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 NSUN4Q96CB9 384 aaKnown RBP12.11□□□□□ -0.47
FAM3A-221ENST00000612856 USP28Q96RU2 1077 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 HINFPQ9BQA5 517 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 NEDD4P46934 1319 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 ACTN2P35609 894 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
FAM3A-221ENST00000612856 CXCL9Q07325 125 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 NONOQ15233 471 aaKnown RBP eCLIP12.11□□□□□ -0.47
FAM3A-221ENST00000612856 ARHGEF16Q5VV41 709 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
FAM3A-221ENST00000612856 ZNHIT6Q9NWK9 470 aaKnown RBP12.11□□□□□ -0.47
FAM3A-221ENST00000612856 MED23Q9ULK4 1368 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 SMIM22K7EJ46 135 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 TTLL1O95922 423 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
FAM3A-221ENST00000612856 LRRC37A3O60309 1634 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L15C9J2P7 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L13C9JLJ4 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L11C9JVI0 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L18D6R9N7 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L22D6RA61 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L17D6RBQ6 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L19D6RCP7 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L20D6RJB6 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
FAM3A-221ENST00000612856 BMP3P12645 472 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 CCDC150Q8NCX0 1101 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 PPM1EQ8WY54 764 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 ZKSCAN4Q969J2 545 aaPredicted RBP12.1□□□□□ -0.47
FAM3A-221ENST00000612856 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 FHOD1Q9Y613 1164 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 STRCP1A6NGW2 1772 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 BCL9O00512 1426 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 KIAA0754O94854 1291 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
FAM3A-221ENST00000612856 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
FAM3A-221ENST00000612856 TDRD7Q8NHU6 1098 aaKnown RBP12.1□□□□□ -0.47
FAM3A-221ENST00000612856 RAVER2Q9HCJ3 691 aaKnown RBP12.1□□□□□ -0.47
FAM3A-221ENST00000612856 N4BP3O15049 544 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 TTBK2Q6IQ55 1244 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 SRLQ86TD4 932 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 CRAMP1Q96RY5 1269 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
FAM3A-221ENST00000612856 MLXIPQ9HAP2 919 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
FAM3A-221ENST00000612856 FBXO18Q8NFZ0 1043 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 DEFB129Q9H1M3 183 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.09□□□□□ -0.47
FAM3A-221ENST00000612856 FAN1Q9Y2M0 1017 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 CEP290O15078 2479 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 EIF3CLB5ME19 914 aaKnown RBP12.09□□□□□ -0.47
FAM3A-221ENST00000612856 FAM13AO94988 1023 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms