RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RILPL2Q969X0 211 aa25.68■■□□□ 1.7
CBWD3-207ENST00000611426 RBM19Q9Y4C8 960 aaKnown RBP25.68■■□□□ 1.7
CBWD3-207ENST00000611426 TACC3Q9Y6A5 838 aa25.68■■□□□ 1.7
CBWD3-207ENST00000611426 ORC4O43929 436 aa25.67■■□□□ 1.7
CBWD3-207ENST00000611426 SNAI1O95863 264 aaPredicted RBP25.67■■□□□ 1.7
CBWD3-207ENST00000611426 BMP2KLQ5H9B9 411 aa25.67■■□□□ 1.7
CBWD3-207ENST00000611426 RCSD1Q6JBY9 416 aa25.67■■□□□ 1.7
CBWD3-207ENST00000611426 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.67■■□□□ 1.7
CBWD3-207ENST00000611426 ZNF467Q7Z7K2 595 aaPredicted RBP25.67■■□□□ 1.7
CBWD3-207ENST00000611426 TOMM22Q9NS69 142 aa25.67■■□□□ 1.7
CBWD3-207ENST00000611426 HOMER2Q9NSB8 354 aa25.67■■□□□ 1.7
CBWD3-207ENST00000611426 PHF24Q9UPV7 400 aa25.67■■□□□ 1.7
CBWD3-207ENST00000611426 NMIQ13287 307 aaPredicted RBP25.66■■□□□ 1.7
CBWD3-207ENST00000611426 SNX17Q15036 470 aa25.66■■□□□ 1.7
CBWD3-207ENST00000611426 TRIM60Q495X7 471 aa25.66■■□□□ 1.7
CBWD3-207ENST00000611426 KCTD1Q719H9 257 aa25.66■■□□□ 1.7
CBWD3-207ENST00000611426 PLEKHM2Q8IWE5 1019 aa25.66■■□□□ 1.7
CBWD3-207ENST00000611426 ZHX1Q9UKY1 873 aaPredicted RBP25.66■■□□□ 1.7
CBWD3-207ENST00000611426 FAM184BQ9ULE4 1060 aa25.66■■□□□ 1.7
CBWD3-207ENST00000611426 PLA2G6O60733 806 aa25.65■■□□□ 1.7
CBWD3-207ENST00000611426 FGRP09769 529 aa25.65■■□□□ 1.7
CBWD3-207ENST00000611426 HSPD1P10809 573 aaKnown RBP25.65■■□□□ 1.7
CBWD3-207ENST00000611426 RRP12Q5JTH9 1297 aaKnown RBP25.65■■□□□ 1.7
CBWD3-207ENST00000611426 LENG1Q96BZ8 264 aaPredicted RBP25.65■■□□□ 1.7
CBWD3-207ENST00000611426 OSBPL3Q9H4L5 887 aa25.65■■□□□ 1.7
CBWD3-207ENST00000611426 PRDM5Q9NQX1 630 aaPredicted RBP25.65■■□□□ 1.7
CBWD3-207ENST00000611426 MTMR7Q9Y216 660 aa25.65■■□□□ 1.7
CBWD3-207ENST00000611426 C1orf53Q5VUE5 145 aa25.64■■□□□ 1.69
CBWD3-207ENST00000611426 GPR153Q6NV75 609 aa25.64■■□□□ 1.69
CBWD3-207ENST00000611426 AGBL1Q96MI9 1066 aa25.64■■□□□ 1.69
CBWD3-207ENST00000611426 ACAD9Q9H845 621 aa25.64■■□□□ 1.69
CBWD3-207ENST00000611426 ACVR2BQ13705 512 aa25.63■■□□□ 1.69
CBWD3-207ENST00000611426 ZNF589Q86UQ0 364 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-207ENST00000611426 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-207ENST00000611426 ZNF536O15090 1300 aa25.63■■□□□ 1.69
CBWD3-207ENST00000611426 NOVP48745 357 aa25.62■■□□□ 1.69
CBWD3-207ENST00000611426 CCDC174Q6PII3 467 aa25.62■■□□□ 1.69
CBWD3-207ENST00000611426 ABHD16BQ9H3Z7 469 aa25.62■■□□□ 1.69
CBWD3-207ENST00000611426 RNF146Q9NTX7 359 aa25.62■■□□□ 1.69
CBWD3-207ENST00000611426 PRR12Q9ULL5 1215 aa25.62■■□□□ 1.69
CBWD3-207ENST00000611426 CCDC171Q6TFL3 1326 aa25.62■■□□□ 1.69
CBWD3-207ENST00000611426 POTEB2H3BUK9 544 aa25.61■■□□□ 1.69
CBWD3-207ENST00000611426 ADAMTS4O75173 837 aa25.61■■□□□ 1.69
CBWD3-207ENST00000611426 SNAP25P60880 206 aa25.61■■□□□ 1.69
CBWD3-207ENST00000611426 TKFCQ3LXA3 575 aa25.61■■□□□ 1.69
CBWD3-207ENST00000611426 FGD4Q96M96 766 aa25.61■■□□□ 1.69
CBWD3-207ENST00000611426 TRERF1Q96PN7 1200 aa25.61■■□□□ 1.69
CBWD3-207ENST00000611426 TSEN34Q9BSV6 310 aaKnown RBP25.61■■□□□ 1.69
CBWD3-207ENST00000611426 SYNRGQ9UMZ2 1314 aa25.61■■□□□ 1.69
CBWD3-207ENST00000611426 A0A1W2PQ45 241 aaPredicted RBP25.6■■□□□ 1.69
CBWD3-207ENST00000611426 A0A1W2PQY0 241 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 DUSP11O75319 330 aaKnown RBP25.6■■□□□ 1.69
CBWD3-207ENST00000611426 ALAS1P13196 640 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 SDSP20132 328 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 MFAP1P55081 439 aaKnown RBP25.6■■□□□ 1.69
CBWD3-207ENST00000611426 HAND2P61296 217 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 CNTN2Q02246 1040 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 TLE2Q04725 743 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 CCDC96Q2M329 555 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 ARMCX2Q7L311 632 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 RASGRP2Q7LDG7 609 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 DCAF4Q8WV16 495 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 ZMYM6O95789 1325 aa25.6■■□□□ 1.69
CBWD3-207ENST00000611426 CCDC144CPQ8IYA2 1237 aa25.59■■□□□ 1.69
CBWD3-207ENST00000611426 TMEM47Q9BQJ4 181 aa25.59■■□□□ 1.69
CBWD3-207ENST00000611426 A1CFQ9NQ94 594 aaKnown RBP25.59■■□□□ 1.69
CBWD3-207ENST00000611426 PDLIM7Q9NR12 457 aa25.59■■□□□ 1.69
CBWD3-207ENST00000611426 TCP11L1Q9NUJ3 509 aa25.59■■□□□ 1.69
CBWD3-207ENST00000611426 MCM3APO60318 1980 aa25.59■■□□□ 1.69
CBWD3-207ENST00000611426 TOP1P11387 765 aaKnown RBP25.58■■□□□ 1.69
CBWD3-207ENST00000611426 ACLYP53396 1101 aa25.58■■□□□ 1.69
CBWD3-207ENST00000611426 CCDC144BQ3MJ40 725 aa25.58■■□□□ 1.69
CBWD3-207ENST00000611426 MFSD6Q6ZSS7 791 aa25.58■■□□□ 1.69
CBWD3-207ENST00000611426 SH3RF1Q7Z6J0 888 aa25.58■■□□□ 1.69
CBWD3-207ENST00000611426 DEFB123Q8N688 67 aa25.58■■□□□ 1.69
CBWD3-207ENST00000611426 FAM133AQ8N9E0 248 aa25.58■■□□□ 1.69
CBWD3-207ENST00000611426 KLHDC9Q8NEP7 349 aa25.58■■□□□ 1.69
CBWD3-207ENST00000611426 KCNA10Q16322 511 aa25.57■■□□□ 1.68
CBWD3-207ENST00000611426 AKNAD1Q5T1N1 836 aa25.57■■□□□ 1.68
CBWD3-207ENST00000611426 NUP133Q8WUM0 1156 aa25.57■■□□□ 1.68
CBWD3-207ENST00000611426 BADQ92934 168 aa25.57■■□□□ 1.68
CBWD3-207ENST00000611426 SPC25Q9HBM1 224 aa25.57■■□□□ 1.68
CBWD3-207ENST00000611426 LTBP2Q14767 1821 aa25.57■■□□□ 1.68
CBWD3-207ENST00000611426 TRIM43BA6NCK2 446 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 MOXD2PA6NHM9 499 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 PCP11498 1178 aaKnown RBP25.56■■□□□ 1.68
CBWD3-207ENST00000611426 TTC22Q5TAA0 569 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 TTBK2Q6IQ55 1244 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 Q7L0L9 218 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 TRIM43Q96BQ3 446 aaPredicted RBP25.56■■□□□ 1.68
CBWD3-207ENST00000611426 STARD7Q9NQZ5 370 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 CCPG1Q9ULG6 757 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 LAMA2P24043 3122 aaKnown RBP25.56■■□□□ 1.68
CBWD3-207ENST00000611426 SOWAHBA6NEL2 793 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 PQBP1O60828 265 aaKnown RBP25.56■■□□□ 1.68
CBWD3-207ENST00000611426 CLTBP09497 229 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 C6orf222P0C671 652 aaPredicted RBP25.56■■□□□ 1.68
CBWD3-207ENST00000611426 SLC16A2P36021 539 aa25.56■■□□□ 1.68
CBWD3-207ENST00000611426 RNF41Q9H4P4 317 aaPredicted RBP25.56■■□□□ 1.68
CBWD3-207ENST00000611426 MYADML2A6NDP7 307 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms