RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 CDX2Q99626 313 aaPredicted RBP28.98■■■□□ 2.23
CDKN3-211ENST00000611205 SEMA6BQ9H3T3 888 aa28.98■■■□□ 2.23
CDKN3-211ENST00000611205 ABHD16BQ9H3Z7 469 aa28.98■■■□□ 2.23
CDKN3-211ENST00000611205 PCDHB15Q9Y5E8 787 aa28.98■■■□□ 2.23
CDKN3-211ENST00000611205 STAT2P52630 851 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 FPGSQ05932 587 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 FAAP100Q0VG06 881 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 CCDC144BQ3MJ40 725 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 ZMYM1Q5SVZ6 1142 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 ARMCX2Q7L311 632 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 ANKRD33Q7Z3H0 272 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.97■■■□□ 2.23
CDKN3-211ENST00000611205 GLT1D1Q96MS3 346 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 TOX2Q96NM4 488 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 SPC25Q9HBM1 224 aa28.97■■■□□ 2.23
CDKN3-211ENST00000611205 ADCY6O43306 1168 aa28.96■■■□□ 2.23
CDKN3-211ENST00000611205 CCSAPQ6IQ19 270 aaPredicted RBP28.96■■■□□ 2.23
CDKN3-211ENST00000611205 ACAD9Q9H845 621 aa28.96■■■□□ 2.23
CDKN3-211ENST00000611205 FDX1P10109 184 aa28.95■■■□□ 2.22
CDKN3-211ENST00000611205 SLC1A4P43007 532 aa28.95■■■□□ 2.22
CDKN3-211ENST00000611205 CCDC144CPQ8IYA2 1237 aa28.95■■■□□ 2.22
CDKN3-211ENST00000611205 PCSK9Q8NBP7 692 aaKnown RBP28.95■■■□□ 2.22
CDKN3-211ENST00000611205 VTI1AQ96AJ9 217 aa28.95■■■□□ 2.22
CDKN3-211ENST00000611205 ASGR1P07306 291 aa28.94■■■□□ 2.22
CDKN3-211ENST00000611205 MX1P20591 662 aa28.94■■■□□ 2.22
CDKN3-211ENST00000611205 CST5P28325 142 aaPredicted RBP28.94■■■□□ 2.22
CDKN3-211ENST00000611205 CNTN2Q02246 1040 aa28.94■■■□□ 2.22
CDKN3-211ENST00000611205 CCDC129Q6ZRS4 1044 aa28.94■■■□□ 2.22
CDKN3-211ENST00000611205 FAM160B2Q86V87 743 aa28.94■■■□□ 2.22
CDKN3-211ENST00000611205 CHURC1Q8WUH1 139 aa28.94■■■□□ 2.22
CDKN3-211ENST00000611205 TTYH1Q9H313 450 aaPredicted RBP28.94■■■□□ 2.22
CDKN3-211ENST00000611205 STX8Q9UNK0 236 aa28.94■■■□□ 2.22
CDKN3-211ENST00000611205 LAMA2P24043 3122 aaKnown RBP28.94■■■□□ 2.22
CDKN3-211ENST00000611205 TSPY2A6NKD2 308 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 MCCP23508 829 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 CTDSPL2Q05D32 466 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 STAG1Q8WVM7 1258 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 AGBL1Q96MI9 1066 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 RNF146Q9NTX7 359 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 ELP1O95163 1332 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 MROH7Q68CQ1 1323 aa28.93■■■□□ 2.22
CDKN3-211ENST00000611205 GJA9P57773 515 aa28.92■■■□□ 2.22
CDKN3-211ENST00000611205 GNASQ5JWF2 1037 aa28.92■■■□□ 2.22
CDKN3-211ENST00000611205 MYLIPQ8WY64 445 aa28.92■■■□□ 2.22
CDKN3-211ENST00000611205 GMCL1Q96IK5 515 aa28.92■■■□□ 2.22
CDKN3-211ENST00000611205 UPF3AQ9H1J1 476 aaKnown RBP28.92■■■□□ 2.22
CDKN3-211ENST00000611205 PPP4R3BQ5MIZ7 849 aa28.91■■■□□ 2.22
CDKN3-211ENST00000611205 CCDC174Q6PII3 467 aa28.91■■■□□ 2.22
CDKN3-211ENST00000611205 KCTD1Q719H9 257 aa28.91■■■□□ 2.22
CDKN3-211ENST00000611205 FAM133AQ8N9E0 248 aa28.91■■■□□ 2.22
CDKN3-211ENST00000611205 A1CFQ9NQ94 594 aaKnown RBP28.91■■■□□ 2.22
CDKN3-211ENST00000611205 INCENPQ9NQS7 918 aa28.91■■■□□ 2.22
CDKN3-211ENST00000611205 MTMR7Q9Y216 660 aa28.91■■■□□ 2.22
CDKN3-211ENST00000611205 ZNF536O15090 1300 aa28.91■■■□□ 2.22
CDKN3-211ENST00000611205 LRRC37A2A6NM11 1700 aa28.9■■■□□ 2.22
CDKN3-211ENST00000611205 TIMP1P01033 207 aa28.9■■■□□ 2.22
CDKN3-211ENST00000611205 ALAS1P13196 640 aa28.9■■■□□ 2.22
CDKN3-211ENST00000611205 NOL8Q76FK4 1167 aaKnown RBP28.9■■■□□ 2.22
CDKN3-211ENST00000611205 MAFAQ8NHW3 353 aaPredicted RBP28.9■■■□□ 2.22
CDKN3-211ENST00000611205 TRERF1Q96PN7 1200 aa28.9■■■□□ 2.22
CDKN3-211ENST00000611205 COL25A1Q9BXS0 654 aaPredicted RBP28.9■■■□□ 2.22
CDKN3-211ENST00000611205 KATNBL1Q9H079 304 aa28.9■■■□□ 2.22
CDKN3-211ENST00000611205 ZBTB47Q9UFB7 747 aaPredicted RBP28.9■■■□□ 2.22
CDKN3-211ENST00000611205 TBX21Q9UL17 535 aa28.9■■■□□ 2.22
CDKN3-211ENST00000611205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.9■■■□□ 2.22
CDKN3-211ENST00000611205 CUL9Q8IWT3 2517 aa28.89■■■□□ 2.22
CDKN3-211ENST00000611205 A0A0U1RQG5 324 aaPredicted RBP28.89■■■□□ 2.22
CDKN3-211ENST00000611205 NMT2O60551 498 aa28.89■■■□□ 2.22
CDKN3-211ENST00000611205 SNAP25P60880 206 aa28.89■■■□□ 2.22
CDKN3-211ENST00000611205 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.88■■■□□ 2.21
CDKN3-211ENST00000611205 FOXP2O15409 715 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 CDK7P50613 346 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 BEX3Q00994 111 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 TKFCQ3LXA3 575 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 RCSD1Q6JBY9 416 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 RASGRP2Q7LDG7 609 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 IL17RBQ9NRM6 502 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 LCTP09848 1927 aa28.88■■■□□ 2.21
CDKN3-211ENST00000611205 SOWAHBA6NEL2 793 aa28.87■■■□□ 2.21
CDKN3-211ENST00000611205 ASB14A6NK59 587 aa28.87■■■□□ 2.21
CDKN3-211ENST00000611205 ARVCFO00192 962 aa28.87■■■□□ 2.21
CDKN3-211ENST00000611205 RANBP6O60518 1105 aaKnown RBP28.87■■■□□ 2.21
CDKN3-211ENST00000611205 FOSL2P15408 326 aa28.87■■■□□ 2.21
CDKN3-211ENST00000611205 TNFAIP2Q03169 654 aa28.87■■■□□ 2.21
CDKN3-211ENST00000611205 MFSD5Q6N075 450 aa28.87■■■□□ 2.21
CDKN3-211ENST00000611205 PRR12Q9ULL5 1215 aa28.87■■■□□ 2.21
CDKN3-211ENST00000611205 A0A0C4DFX4 3053 aa28.86■■■□□ 2.21
CDKN3-211ENST00000611205 TLR3O15455 904 aaKnown RBP28.86■■■□□ 2.21
CDKN3-211ENST00000611205 VPS53Q5VIR6 699 aa28.86■■■□□ 2.21
CDKN3-211ENST00000611205 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.86■■■□□ 2.21
CDKN3-211ENST00000611205 PPP1R12CQ9BZL4 782 aa28.86■■■□□ 2.21
CDKN3-211ENST00000611205 SALL3Q9BXA9 1300 aa28.86■■■□□ 2.21
CDKN3-211ENST00000611205 TMEM265A0A087WTH1 108 aa28.85■■■□□ 2.21
CDKN3-211ENST00000611205 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.85■■■□□ 2.21
CDKN3-211ENST00000611205 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.85■■■□□ 2.21
CDKN3-211ENST00000611205 CTAGE5O15320 804 aa28.85■■■□□ 2.21
CDKN3-211ENST00000611205 PLA2G6O60733 806 aa28.85■■■□□ 2.21
CDKN3-211ENST00000611205 CCDC96Q2M329 555 aa28.85■■■□□ 2.21
CDKN3-211ENST00000611205 MUM1L1Q5H9M0 696 aa28.85■■■□□ 2.21
CDKN3-211ENST00000611205 ANKRD45Q5TZF3 282 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms