RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 BLIDQ8IZY5 108 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 KAT14Q9H8E8 782 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 PNPLA7Q6ZV29 1317 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 MOCS3O95396 460 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 TECP42680 631 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 STK4Q13043 487 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 KCTD16Q68DU8 428 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 C2CD5Q86YS7 1000 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 NOC4LQ9BVI4 516 aaKnown RBP22.85■■□□□ 1.25
SSBP3-216ENST00000610401 POTEB2H3BUK9 544 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 COG1Q8WTW3 980 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 GJA10Q969M2 543 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 TANGO6Q9C0B7 1094 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 DISC1Q9NRI5 854 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 SLAIN2Q9P270 581 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 NAALADL2Q58DX5 795 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 PROCA1Q8NCQ7 364 aaPredicted RBP22.84■■□□□ 1.25
SSBP3-216ENST00000610401 AFAP1L1Q8TED9 768 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 TNFRSF25Q93038 417 aa22.84■■□□□ 1.25
SSBP3-216ENST00000610401 PSMA7O14818 248 aa22.83■■□□□ 1.25
SSBP3-216ENST00000610401 ANKRD40Q6AI12 368 aa22.83■■□□□ 1.25
SSBP3-216ENST00000610401 ANKRD18AQ8IVF6 992 aa22.83■■□□□ 1.25
SSBP3-216ENST00000610401 MKNK2Q9HBH9 465 aa22.83■■□□□ 1.25
SSBP3-216ENST00000610401 CCNT1O60563 726 aaKnown RBP22.83■■□□□ 1.25
SSBP3-216ENST00000610401 SYF2O95926 243 aaKnown RBP22.83■■□□□ 1.25
SSBP3-216ENST00000610401 SPAG1Q07617 926 aa22.83■■□□□ 1.25
SSBP3-216ENST00000610401 LRRC41Q15345 812 aa22.83■■□□□ 1.25
SSBP3-216ENST00000610401 MUM1L1Q5H9M0 696 aa22.83■■□□□ 1.25
SSBP3-216ENST00000610401 ELOA2Q8IYF1 753 aaPredicted RBP22.83■■□□□ 1.25
SSBP3-216ENST00000610401 COL5A2P05997 1499 aaPredicted RBP22.83■■□□□ 1.24
SSBP3-216ENST00000610401 ESYT3A0FGR9 886 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 ADAMTS2O95450 1211 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 USP5P45974 858 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 USP14P54578 494 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 NFRKBQ6P4R8 1299 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 HNRNPLLQ8WVV9 542 aaKnown RBP22.83■■□□□ 1.24
SSBP3-216ENST00000610401 CCDC51Q96ER9 411 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 CCDC42Q96M95 316 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 SAMM50Q9Y512 469 aa22.83■■□□□ 1.24
SSBP3-216ENST00000610401 EPHB6O15197 1021 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 KRT86O43790 486 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 PLCG1P19174 1290 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 TRAPPC11Q7Z392 1133 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 DNAAF5Q86Y56 855 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 CNOT6LQ96LI5 555 aaKnown RBP22.82■■□□□ 1.24
SSBP3-216ENST00000610401 GBP3Q9H0R5 595 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 DMGDHQ9UI17 866 aaKnown RBP22.82■■□□□ 1.24
SSBP3-216ENST00000610401 EIF3CLB5ME19 914 aaKnown RBP22.82■■□□□ 1.24
SSBP3-216ENST00000610401 ADSSL1Q8N142 457 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 EIF3CQ99613 913 aaKnown RBP22.82■■□□□ 1.24
SSBP3-216ENST00000610401 SELENOOQ9BVL4 669 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 DCP1AQ9NPI6 582 aaPredicted RBP22.82■■□□□ 1.24
SSBP3-216ENST00000610401 CAPN6Q9Y6Q1 641 aa22.82■■□□□ 1.24
SSBP3-216ENST00000610401 CCT5P48643 541 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 DIXDC1Q155Q3 683 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 TXNRD3Q86VQ6 643 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 PNMA1Q8ND90 353 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 FAM84BQ96KN1 310 aaPredicted RBP22.81■■□□□ 1.24
SSBP3-216ENST00000610401 LRRC1Q9BTT6 524 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 RBM28Q9NW13 759 aaKnown RBP22.81■■□□□ 1.24
SSBP3-216ENST00000610401 MYH7P12883 1935 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 LGALS16A8MUM7 142 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 ATP1A2P50993 1020 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 APBA1Q02410 837 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 FAM71BQ8TC56 605 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 MS4A14Q96JA4 679 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 NLRC4Q9NPP4 1024 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 TBC1D7Q9P0N9 293 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 HPCAL4Q9UM19 191 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 H7C1D1 291 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 SSBP05455 408 aaKnown RBP eCLIP22.81■■□□□ 1.24
SSBP3-216ENST00000610401 TXKP42681 527 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 TXNRD1Q16881 649 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 HAUS4Q9H6D7 363 aa22.81■■□□□ 1.24
SSBP3-216ENST00000610401 RAD21O60216 631 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 KIF5AQ12840 1032 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 NUP188Q5SRE5 1749 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 RMND1Q9NWS8 449 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 BAZ2AQ9UIF9 1905 aaKnown RBP22.8■■□□□ 1.24
SSBP3-216ENST00000610401 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 IL6STP40189 918 aaPredicted RBP22.8■■□□□ 1.24
SSBP3-216ENST00000610401 ACBD3Q9H3P7 528 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 CENPHQ9H3R5 247 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 EXOC1Q9NV70 894 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 PKD1L3Q7Z443 1732 aa22.8■■□□□ 1.24
SSBP3-216ENST00000610401 AKR1B10O60218 316 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 IBSPP21815 317 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-216ENST00000610401 PFKFB3Q16875 520 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-216ENST00000610401 FAM107BQ9H098 131 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 BMP15O95972 392 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 EIF6P56537 245 aaKnown RBP22.79■■□□□ 1.24
SSBP3-216ENST00000610401 SPA17Q15506 151 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 MICALL1Q8N3F8 863 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 IFT81Q8WYA0 676 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 PACSIN2Q9UNF0 486 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-216ENST00000610401 ZSCAN5CA6NGD5 496 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-216ENST00000610401 LRRC10BA6NIK2 292 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 LIG3P49916 1009 aa22.79■■□□□ 1.24
SSBP3-216ENST00000610401 TDRD12Q587J7 1177 aaKnown RBP22.79■■□□□ 1.24
SSBP3-216ENST00000610401 SH2D3CQ8N5H7 860 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms