RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 USP17L24Q0WX57 530 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 KRT40Q6A162 431 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 RGMBQ6NW40 437 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
CTCFL-214ENST00000608108 RASAL3Q86YV0 1011 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 FBXO18Q8NFZ0 1043 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 AGTPBP1Q9UPW5 1226 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 BRD1O95696 1058 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 CETPP11597 493 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 MOGSQ13724 837 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 FOXD4L5Q5VV16 416 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-214ENST00000608108 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-214ENST00000608108 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 FOXD4L4Q8WXT5 416 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-214ENST00000608108 SHISA4Q96DD7 197 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 RANBP17Q9H2T7 1088 aaKnown RBP12.84□□□□□ -0.35
CTCFL-214ENST00000608108 BARHL2Q9NY43 387 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
CTCFL-214ENST00000608108 MYH15Q9Y2K3 1946 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 CCL15-CCL14A0A0B4J2E2 113 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 STXBP3O00186 592 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-214ENST00000608108 ZSCAN22P10073 491 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-214ENST00000608108 NAPAP54920 295 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 COG2Q14746 738 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 CCL15Q16663 113 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 ATG4CQ96DT6 458 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 SH3GLB2Q9NR46 395 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 KCNJ14Q9UNX9 436 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 A0A0G2JMZ2 1700 aa12.83□□□□□ -0.36
CTCFL-214ENST00000608108 MMP1P03956 469 aa12.82□□□□□ -0.36
CTCFL-214ENST00000608108 SLC10A3P09131 477 aa12.82□□□□□ -0.36
CTCFL-214ENST00000608108 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-214ENST00000608108 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-214ENST00000608108 PABPC4Q13310 644 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTCFL-214ENST00000608108 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
CTCFL-214ENST00000608108 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-214ENST00000608108 COA7Q96BR5 231 aa12.82□□□□□ -0.36
CTCFL-214ENST00000608108 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
CTCFL-214ENST00000608108 SLC38A10Q9HBR0 1119 aa12.82□□□□□ -0.36
CTCFL-214ENST00000608108 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-214ENST00000608108 PCDHA1Q9Y5I3 950 aa12.82□□□□□ -0.36
CTCFL-214ENST00000608108 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-214ENST00000608108 VWA5AO00534 786 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 F13A1P00488 732 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 NLRP5P59047 1200 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 SAFBQ15424 915 aaKnown RBP eCLIP12.81□□□□□ -0.36
CTCFL-214ENST00000608108 USH1GQ495M9 461 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 GPAT2Q6NUI2 795 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 FBXO11Q86XK2 927 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-214ENST00000608108 BRI3BPQ8WY22 251 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 HOXC10Q9NYD6 342 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
CTCFL-214ENST00000608108 TCHHQ07283 1943 aa12.81□□□□□ -0.36
CTCFL-214ENST00000608108 ZBED4O75132 1171 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 ICAM1P05362 532 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 FDX1P10109 184 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-214ENST00000608108 CALML3P27482 149 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 KIF23Q02241 960 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-214ENST00000608108 GNL2Q13823 731 aaKnown RBP12.8□□□□□ -0.36
CTCFL-214ENST00000608108 PAXIP1Q6ZW49 1069 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-214ENST00000608108 DIS3L2Q8IYB7 885 aaKnown RBP12.8□□□□□ -0.36
CTCFL-214ENST00000608108 CCDC102AQ96A19 550 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 ASCC2Q9H1I8 757 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-214ENST00000608108 BRMS1Q9HCU9 246 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 ZNF536O15090 1300 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 ESYT2A0FGR8 921 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 OSBPP22059 807 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 KRT2P35908 639 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 APLP1P51693 650 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 TRAF1Q13077 416 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 NPY5RQ15761 445 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 CPXCR1Q8N123 301 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 ZMYND12Q9H0C1 365 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 CCPG1Q9ULG6 757 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 ADAMTS5Q9UNA0 930 aa12.8□□□□□ -0.36
CTCFL-214ENST00000608108 SMCO2A6NFE2 343 aa12.79□□□□□ -0.36
CTCFL-214ENST00000608108 MANSC4A6NHS7 340 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-214ENST00000608108 FAM155AB1AL88 458 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-214ENST00000608108 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
CTCFL-214ENST00000608108 BTBD19C9JJ37 291 aa12.79□□□□□ -0.36
CTCFL-214ENST00000608108 PDHXO00330 501 aa12.79□□□□□ -0.36
CTCFL-214ENST00000608108 GNA11P29992 359 aa12.79□□□□□ -0.36
CTCFL-214ENST00000608108 ADCY7P51828 1080 aa12.79□□□□□ -0.36
CTCFL-214ENST00000608108 OAZ1P54368 228 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms